Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1338 |
Symbol | nhaR |
ID | 1169159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1395632 |
End bp | 1396540 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637343282 |
Product | transcriptional activator NhaR |
Protein accession | NP_716958 |
Protein GI | 24372916 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCATC TCAATTACAA CCATCTCTAC TACTTTTGGA TGATCAAGAA GAAGGGCTCT GTGGCTAAGG CGGCAGAAGC CCTTTATTTG ACTCCCCAAA CCATTACCGG TCAAATTCGT GCCTTAGAAG ACAGGCTAAA CGGCAGTTTA TTTAAACGTG TCGGACGTAA CCTAGAGGCC ACTGAGCTTG GAGAACTCGT CTTTCGCTAT GCCGATAGGA TGTTTTCCTT AAGTTATGAG ATGCTTGATT TGCTTAATTA TCAAAAAGAT AATGCCATTC TATTTGAGGT CGGAATTGCC GATGCGTTAT CAAAAGCTTT ATCAAGCCGA GTGTTGCTCT CGGTTGTGCC TAATGATGGT TCCATGCACC TTGCCTGTTA TGAAGCGACT CACGAAAGCT TAATGTCCCG TTTACGCGAG CATAAACTGG ATATGATCCT CTCCGATTGT GCGGGTGAGT CGCTTAAATA TCCCGAAATT CTATCGAAAA AACTGGGTGA GTGTGGCGTG AGTTTCTTTT CCGCTGAAAC TTATAGCGCG GATTTTCCCG CCTGTTTAGA GCAAGGCCAA CTATTGATCC CTGGCCGCAG AACTTCGCTC GGTCAGCAAT TATATCGTTG GTTTGATGAG CAAAATCTCA ACGTGAGTAT TTTAGGTGAG TTTGACGATG CGGCCATGAT GAAGGCTTTT GGCTACCTTA AACGTGGGAT CTTTGTAACG CCTTCGGTTT ATCCGCAAGA AGTGGTTTCC CATGGTATGC ATTTACTCGG TGAAACACTC GATGTGAAAG AAGAATACCA TGTGATGTTT GCCGAGCGAA TGATCCAGCA TCCTGCGGTT AAGCGCCTGT TAGAAACTGA TTTTAGTGAT TTATTTGCTG GATTAGATAC CCAAGTGCAG CAGTGTTAA
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Protein sequence | MLHLNYNHLY YFWMIKKKGS VAKAAEALYL TPQTITGQIR ALEDRLNGSL FKRVGRNLEA TELGELVFRY ADRMFSLSYE MLDLLNYQKD NAILFEVGIA DALSKALSSR VLLSVVPNDG SMHLACYEAT HESLMSRLRE HKLDMILSDC AGESLKYPEI LSKKLGECGV SFFSAETYSA DFPACLEQGQ LLIPGRRTSL GQQLYRWFDE QNLNVSILGE FDDAAMMKAF GYLKRGIFVT PSVYPQEVVS HGMHLLGETL DVKEEYHVMF AERMIQHPAV KRLLETDFSD LFAGLDTQVQ QC
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