Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1301 |
Symbol | pyrB |
ID | 1169124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1353321 |
End bp | 1354340 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343247 |
Product | aspartate carbamoyltransferase |
Protein accession | NP_716921 |
Protein GI | 24372879 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCAGT TCGAAGGATC CCATATCCTC TCCGTAAACC AGTTAGATCT TGATTCAATC CAAACTATTT TTAATGTCGC CCACCGCATG ATGCCCTATG CTCTTCGAGA GAAGCGCACA AAAGTGCTCG AAGGCGCCAT TTTAGGTAAC CTGTTTTTCG AGCCAAGTAC CCGTACCCGC GTCAGTTTTG GCTGTGCCTT TAACTTACTC GGCGGCCATG TGCGTGAAAC CACAGGCATG GCCTCTTCGT CCTTATCTAA GGGTGAATCC CTGTACGATA CAGCCCGCGT ACTCTCGACC TATTCCGATG TGATTGCGAT GCGCCACCCT GATTCTTACT CTGTCAAAGA GTTTGCTGAA GGTAGCCGAG TCCCCGTGAT CAACGGCGGT GATGGTTCGA ACGAGCACCC AACCCAAGCA TTGCTCGATT TGTTTACTAT TCAAAAAGAG TTAGGTCATG CGAGTCGAGG CATCGATGGC ATGCATATCG CCATGGTTGG CGATTTAAAA TTTGGCCGTA CCGTGCATTC ATTGTCACGC CTGCTATGCA TGTATAAGAA CATCAGCTTC ACACTGATTT CGCCAACTGA ATTAGCTATG CCTGATTATG TGATCTCTGA CATTGAAAAT GCTGGCCATA GCATCAAAAT AACAGACCAG CTTGAAGGCC ACTTAGATAA AGCCGATATT CTTTATCTGA CCCGCATTCA AGAAGAGCGC TTCCCATCCC AGGAAGAAGC AAACAAATAC CGCGGTAAAT TCCGTTTGAA TCGCAGTATT TATACCCAAC ATTGCAAATC TAACACTGTG ATCATGCACC CGCTGCCACG GGATTCGCGT GCGCAAGCTA ATGAATTAGA TAATGATTTG AACAGCCATC CTAATCTCGC TATTTTCAGA CAGGCGGACA ATGGACTGCT AATTCGTATG GCACTGTTTG CATTGACACT CGGGGTTGAC TCGCAACTCG AAAAATATGA GTGTCCAGTT AATTGGTATT CACGTAAAGC CGATCGCTAA
|
Protein sequence | MNQFEGSHIL SVNQLDLDSI QTIFNVAHRM MPYALREKRT KVLEGAILGN LFFEPSTRTR VSFGCAFNLL GGHVRETTGM ASSSLSKGES LYDTARVLST YSDVIAMRHP DSYSVKEFAE GSRVPVINGG DGSNEHPTQA LLDLFTIQKE LGHASRGIDG MHIAMVGDLK FGRTVHSLSR LLCMYKNISF TLISPTELAM PDYVISDIEN AGHSIKITDQ LEGHLDKADI LYLTRIQEER FPSQEEANKY RGKFRLNRSI YTQHCKSNTV IMHPLPRDSR AQANELDNDL NSHPNLAIFR QADNGLLIRM ALFALTLGVD SQLEKYECPV NWYSRKADR
|
| |