Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1293 |
Symbol | uppP |
ID | 1169112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1343128 |
End bp | 1343928 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637343237 |
Product | undecaprenyl pyrophosphate phosphatase |
Protein accession | NP_716915 |
Protein GI | 24372873 |
COG category | [V] Defense mechanisms |
COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACGT TTCAGGTAAT TATTTTAGCG CTAATTCAAG GGTTAACAGA ATTTCTTCCT ATTTCCAGCT CGGCTCACCT TATCTTACCT GCGCAGCTTT TAGGTTGGGA AGATCAAGGG TTATCCTTCG ACGTAGCTGT GAATACGGGT TCGTTATTCG CCGTGGTGAT TTATTTTAGA CATGAGCTCT GGGCTATGTT TAAGGCGTGG ATTGCCAGCA TAGTGAAAGG TCAGCATTCC GATGATAGTA AGCTAGCGTG GTGGATCATT CTTGCTACTT TACCTGCGGT CTTTTTTGGC TTTATGGCGA AAGACTTTAT TGCAACCCAT CTGCGTAATA CCGGTGTGAT AGCCGTGACC ACGGTGGTGT TTGGTTTGTT GCTTTGGTGG GCGGATAAAA TGTCACGTCA CGATTTAACC ATTTATCAAA CAGGTTGGCG TAAGGCGTTA TTAATTGGTT TTGCTCAGGC GTTGGCGTTA ATTCCAGGTA CTTCACGCTC AGGCGCGACG ATGACTGCTG CACTCATGTT AGGCCTTAGT CGTGATGCGG CGGCGCGTTT TTCCTTTTTG ATGTCTGTGC CTGTGAGTTT AGGTGCGGCA ATTTTAGTGG GTAAAGATTT GGCTGAGAGC CCGCTTCCCA TTGATTATCA AGCGCTGACC CTCGGAACAG TGATTTCCTT TGCTGCGGCT TATCTATGTA TTCATTATTT CTTGAAAATT ATTAGCCGCA TGGGTATGAC GCCTTTCGTG ATTTATCGTC TGGCCCTTGG TGCTGTGTTG TGTGGATTTA TCTTCTTATA A
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Protein sequence | MDTFQVIILA LIQGLTEFLP ISSSAHLILP AQLLGWEDQG LSFDVAVNTG SLFAVVIYFR HELWAMFKAW IASIVKGQHS DDSKLAWWII LATLPAVFFG FMAKDFIATH LRNTGVIAVT TVVFGLLLWW ADKMSRHDLT IYQTGWRKAL LIGFAQALAL IPGTSRSGAT MTAALMLGLS RDAAARFSFL MSVPVSLGAA ILVGKDLAES PLPIDYQALT LGTVISFAAA YLCIHYFLKI ISRMGMTPFV IYRLALGAVL CGFIFL
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