| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1275 |
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| Symbol | gabD |
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| ID | 1169095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1324098 |
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| End bp | 1325546 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637343220 |
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| Product | succinate-semialdehyde dehydrogenase |
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| Protein accession | NP_716898 |
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| Protein GI | 24372856 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGCTTA ACGATCCGAG TCTGCTACGT CAGCAATGTT ATATCAATGG TCAGTGGTGC
GATGCCAACT CTAAGGAAAC CGTTGCGATT ACTAATCCGG CAACGGGCGC AGTGATCGCC
TGTGTCCCTG TGATGGGGCA GGCCGAAACT CAAGCGGCGA TTGCGGCAGC TGAGGCGGCA
TTACCCGCAT GGCGAGCATT AACCGCCAAA GAGCGCGGTG CCAAGCTGCG CCGTTGGTTC
GAATTATTGA ATGAAAACAG TGATGATTTA GCACTGCTGA TGACCAGTGA GCAGGGCAAG
CCTCTGACTG AAGCCAAAGG TGAAGTGACC TACGCGGCAT CTTTTATCGA ATGGTTTGCC
GAAGAGGCTA AGCGCATCTA CGGCGATACT ATTCCGGGGC ATCAAGGCGA TAAACGCATT
ATGGTCATCA AGCAGCCTGT CGGGGTGACA GCGGCGATTA CGCCATGGAA CTTTCCTGCA
GCGATGATCA CCCGAAAAGC GGCGCCCGCG CTAGCTGCAG GTTGTACTAT GGTGGTTAAA
CCTGCGCCGC AAACGCCCTT TACCGCATTA GCATTAGCCG TGTTGGCTGA ACGTGCGGGT
ATTCCGGCAG GGGTCTTTAG TGTGATAACG GGTGACGCTA TTGCCATCGG TAATGAGATG
TGCACTAACC CGATAGTGCG TAAGTTGTCT TTCACGGGCT CAACCAATGT TGGGATTAAG
TTGATGGCGC AGTGCGCGCC AACGCTGAAA AAATTATCTT TAGAATTAGG TGGTAATGCG
CCTTTTATTG TATTCGATGA TGCCAATATT GATGCGGCCG TTGAAGGCGC CATGATCGCT
AAATATCGCA ATGCGGGCCA AACCTGCGTT TGCGCTAACC GCATTTATGT GCAGGCGGGC
GTGTATGACG AATTTGCTGA AAAGCTCAGT ATGGCCGTGG CTAAGTTAAA GGTTGGTGAG
GGGATTATTG CGGGTGTGAC AACCGGACCG CTGATCAATG CAGCAGCGGT GGAAAAAGTG
CAAAGTCATC TTGAAGATGC CATCAAAAAA GGCGCGACAG TGCTTGCCGG TGGGAAAGTT
CACGAACTTG GCGGTAATTT CTTTGAGCCA ACCGTGCTGA CCAATGCCGA TAAAAGCATG
CGTGTTGCCC GTGAAGAAAC GTTTGGCCCA CTCGCGCCGT TGTTTAAATT TAACGATGTG
GATGATGTGA TCAAACAAGC CAATGATACC GAGTTTGGTT TAGCGGCATA TTTCTATGGC
CGTGATATTT CCTTGGTGTG GAAAGTCGCC GAGTCGCTCG AATACGGCAT GGTGGGGGTT
AATACTGGCT TGATTTCCAC CGAAGTGGCG CCCTTTGGCG GAATGAAGTC TTCAGGGCTT
GGCCGTGAAG GTTCTAAGTA TGGCATCGAA GAATATTTAG AAATTAAATA TATCTGTATG
TCTGTTTAA
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| Protein sequence | MLLNDPSLLR QQCYINGQWC DANSKETVAI TNPATGAVIA CVPVMGQAET QAAIAAAEAA
LPAWRALTAK ERGAKLRRWF ELLNENSDDL ALLMTSEQGK PLTEAKGEVT YAASFIEWFA
EEAKRIYGDT IPGHQGDKRI MVIKQPVGVT AAITPWNFPA AMITRKAAPA LAAGCTMVVK
PAPQTPFTAL ALAVLAERAG IPAGVFSVIT GDAIAIGNEM CTNPIVRKLS FTGSTNVGIK
LMAQCAPTLK KLSLELGGNA PFIVFDDANI DAAVEGAMIA KYRNAGQTCV CANRIYVQAG
VYDEFAEKLS MAVAKLKVGE GIIAGVTTGP LINAAAVEKV QSHLEDAIKK GATVLAGGKV
HELGGNFFEP TVLTNADKSM RVAREETFGP LAPLFKFNDV DDVIKQANDT EFGLAAYFYG
RDISLVWKVA ESLEYGMVGV NTGLISTEVA PFGGMKSSGL GREGSKYGIE EYLEIKYICM
SV
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