| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1226 |
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| Symbol | radA |
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| ID | 1169052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1274209 |
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| End bp | 1275573 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637343177 |
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| Product | DNA repair protein RadA |
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| Protein accession | NP_716849 |
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| Protein GI | 24372807 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA ATAAAACCGC GTACGTGTGC AATGAGTGTG GGCAGGATTT TCCCCGTTGG
CAAGGGCAAT GCAGTGCTTG TCACGAGTGG AATACGATAA CTGAAGTACG CTTAGGCGCC
GCCTCGCCCG GACGGGGGAC TAAATTTGCC GGTTATGCCG GTGCTGGCAG TAGCGAAGTC
AAAACCTTAG ATCAAATAGA TCTTAATGCT TTACCCCGTA TTGTTAGCCA TTTTGGTGAA
CTCGATCGTG TACTCGGTGG GGGAATTGTT CCTGGCTCGG CGATTCTGAT TGGCGGTCAT
CCGGGAGCGG GCAAGAGTAC TTTGCTGCTT CAAACCCTAT GCCATTTAGC GGAGCAAATG
CCTGCGTTGT ATGTGACGGG GGAGGAATCC TTACAGCAGG TTGCCATGCG AGCCCATCGC
CTTGGTTTGC CGACCAATAA ACTGCGGATG TTATCCGAGA CGAGTGTTGA GCAGATTTGC
GAAATCGCCC TGCAAGAATC CCCGAAAGTG ATTGTTGTCG ACTCTATTCA AGTCATGCAC
ATGAGCGATG TGGCATCGAG CCCTGGCAGT GTATCGCAGG TGCGTGAATC GGCTTCCTAT
TTAACTCGTT TTGCAAAACA GCACGGCATT GCTGTGATTA TGGTGGGCCA TGTGACTAAG
GATGGTAGCC TCGCGGGTCC TAAAGTGCTG GAACACTGTA TCGATTGCTC AGTCATGTTT
GAAGGGGATA GCGACAGTCG TTATCGTACT TTACGCTCCC ATAAAAACCG GTTTGGGGCG
ATCAATGAAC TTGGGGTGTT TGCCATGACA GAGCGCGGCC TAAAGGAGGT TGCTAATCCT
TCGGCAATTT TCCTCTCCCG TGGTGAGGAG GAATCCTCGG GATCCTTGGT CATGGTGGTG
TGGGAAGGTA CGCGTCCGCT ACTGGTTGAA TTGCAAGTGC TGGTGGATAA TTCGGCCATG
TCGAATCCGC GCCGCGTGGC GGTGGGGATG GATGCAAACC GTCTAGCCAT GTTACTTGCG
GTCATGCATC GCCATGGTGG CTTGCAAATG TCGGATCAGG ACGTGTTTGT GAACGTGGTA
GGCGGGGTTA AAGTGACCGA AACCAGTGCC GACTTAACCC TGCTACTGGC CATGGTATCG
AGTTTTCGTG GCGATATTTT ACCGAGCGAT TTGGTTGTGT TCGGTGAGGT AGGGTTATCT
GGTGAAATTC GCCCAGTGCC AAATGGCCAA GAGCGTTTAG TCGAAGCCGC TAAACATGGT
TTTAAACGAG CGATAGTGCC TCGAGCTAAC GTGCCGAAAA AACCGCCTGT GGGAATGGAA
GTGGTGGGCG TTTCCAAACT ATCAGAAGCC CTTGAAGCAA TCTAA
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| Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCSACHEW NTITEVRLGA ASPGRGTKFA GYAGAGSSEV
KTLDQIDLNA LPRIVSHFGE LDRVLGGGIV PGSAILIGGH PGAGKSTLLL QTLCHLAEQM
PALYVTGEES LQQVAMRAHR LGLPTNKLRM LSETSVEQIC EIALQESPKV IVVDSIQVMH
MSDVASSPGS VSQVRESASY LTRFAKQHGI AVIMVGHVTK DGSLAGPKVL EHCIDCSVMF
EGDSDSRYRT LRSHKNRFGA INELGVFAMT ERGLKEVANP SAIFLSRGEE ESSGSLVMVV
WEGTRPLLVE LQVLVDNSAM SNPRRVAVGM DANRLAMLLA VMHRHGGLQM SDQDVFVNVV
GGVKVTETSA DLTLLLAMVS SFRGDILPSD LVVFGEVGLS GEIRPVPNGQ ERLVEAAKHG
FKRAIVPRAN VPKKPPVGME VVGVSKLSEA LEAI
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