Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1223 |
Symbol | serB |
ID | 1169049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1269579 |
End bp | 1270571 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637343174 |
Product | phosphoserine phosphatase |
Protein accession | NP_716846 |
Protein GI | 229220629 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGCT TGAACCAAAA TCCGCTGTTT GTATGGTTAG CTGCTAGCCC TTCACCTCGT TTTGAATATC AGGGGATCTG TTTCGAGGCT TATCAAGAAT CGTCAATGCG GCCATCCCTG AGTCAATTTG CTATGCGTTT GATTTACGAA GATATCAGTC TTGAGGATGC CCTAGCGACT TGGATCGTCT CTCTGGCTAA AAGCCTCAAA TTAACCTCGC TCTCCATCGC GCCTATACGC CGTCAAGTGG CGCTGCATTG TGTTGAGTTG GCACTTCCTG TAGAACCCAC TGCCGAGTTG TTAGCTACAT TTCCGCTGCA GGCAGAGTTA CACCTTATTC GCGGCCCATT ACCTCAACTG AGTAAACCTG GTTTGTTGGT GATGGATATG GATTCTACAG CGATTCAAAT TGAATGTATT GACGAACTTG CAGCGATGGC TGGGGTGGGA GAGCAAGTTG CGGCGATAAC AGAGCGGGCG ATGCAGGGCG AGCTGGATTT TGAGCAGAGT CTGCGCCAAA GGGTTGCCCA GCTTAAAGGT GCCGATGCCA AGATTATTCA CACCCTGTGC GAGAGCTTGC CATTTATGCC CGGGCTAGAA GCTATGCTGG CGGAGCTTAA GTCCCATCAT TGGCGTTTAG TGGTCGCATC AGGTGGCTTT ACGCCATTTG TTGGGCATTT AAAACAATTA CTCAATTTAG ATGCTGCCTT TGCCAATGAG TTAGTGATTA CAGACGGCAA GCTGGCGGGT ACTGTAACGG GCAAAATCGT CGATGCGCAG TTTAAGGCCG ATGTGGTCAG CCGTTGCAGC CAAGAATGGC AGATCCCTGC AGGGCAACGT GTAGCGATAG GCGATGGCGC GAATGATATC CCTATGGTGC AGGCGGCAGA CTTTGGTATT GCCTTCCATG CTAAACCTAA ACTTGCAGCT GCGGCAGATG CGAGGATCCG TGGCTTGGAC CTGCGGGTTT TACCTTATTT GTTACAGTTT TAA
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Protein sequence | MESLNQNPLF VWLAASPSPR FEYQGICFEA YQESSMRPSL SQFAMRLIYE DISLEDALAT WIVSLAKSLK LTSLSIAPIR RQVALHCVEL ALPVEPTAEL LATFPLQAEL HLIRGPLPQL SKPGLLVMDM DSTAIQIECI DELAAMAGVG EQVAAITERA MQGELDFEQS LRQRVAQLKG ADAKIIHTLC ESLPFMPGLE AMLAELKSHH WRLVVASGGF TPFVGHLKQL LNLDAAFANE LVITDGKLAG TVTGKIVDAQ FKADVVSRCS QEWQIPAGQR VAIGDGANDI PMVQAADFGI AFHAKPKLAA AADARIRGLD LRVLPYLLQF
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