Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1196 |
Symbol | rrmJ |
ID | 1169024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1239182 |
End bp | 1239811 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637343149 |
Product | 23S rRNA methyltransferase J |
Protein accession | NP_716821 |
Protein GI | 24372779 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGTA AAAAACGTAC GGCCAGTTCC AATCGCTGGA TGCTGGAACA CTTTGATGAT CATTATGTCA AACTAGCACA GAAACGGGGA TTGCGTTCTC GCGCTGCGTT TAAGCTTGAA GAACTACAGC AAAAGGATCA GTTGATCCGC CCAGGTATGA CGGTTGTTGA CCTAGGGGCT GCTCCTGGTG GGTGGTCTCA GGTAGCCGTT AAGCTAGTCG GAGACAAAGG TAAAGTCATC GCCTGTGATA TTTTACCGAT GGATCCCATC GTCGGCGTGG ATTTCTTGCA AGGGGACTTT CGTGAAGAGA AAGTGCTTGA AGCATTGCTA ACTCGCGTCG GTGCAGATAA GGTTGACGTT GTATTGTCTG ATATGGCGCC CAACATGAGT GGTTCAGACG GTGTCGATCA GCCGCGCGCC ATGTATTTAG TCGAGTTGGC GTTAGATATG TGTCATCAAG TATTGGCACC TAACGGCAGT TTTGCGGTCA AAGTCTTTCA GGGGGAGGGG TTTGACGAAT ATATGAAGGC GGTTAAAGAG GCATTCAAAG TCGTAAAAAC ACGTAAACCG GACTCGTCGC GGGCACGCTC CCGTGAGGTC TATCTTGTGG CGACAGGGTA CAAGTTGTAG
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Protein sequence | MSGKKRTASS NRWMLEHFDD HYVKLAQKRG LRSRAAFKLE ELQQKDQLIR PGMTVVDLGA APGGWSQVAV KLVGDKGKVI ACDILPMDPI VGVDFLQGDF REEKVLEALL TRVGADKVDV VLSDMAPNMS GSDGVDQPRA MYLVELALDM CHQVLAPNGS FAVKVFQGEG FDEYMKAVKE AFKVVKTRKP DSSRARSREV YLVATGYKL
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