Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1185 |
Symbol | |
ID | 1169014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1228241 |
End bp | 1229332 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637343132 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | NP_716810 |
Protein GI | 24372768 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTTA AATGCGGCAT TGTTGGTCTT CCTAACGTAG GTAAATCAAC GCTTTTTAAT GCGTTAACTA AGGCTGGCAT CGAAGCGGCA AACTTCCCGT TTTGTACCAT CGAGCCAAAC ACTGGCGTTG TACCTGTGCC GGATCCACGC TTAGACGCGC TGGCGGCGAT TGTTAATCCT CAGCGTGTAT TGCCTACTAC CATGGAGTTC GTGGATATCG CAGGCCTTGT TGCTGGCGCT TCTAAAGGTG AAGGTTTAGG TAACAAGTTC CTTGCTAACA TCCGTGAGAC GGATGCGATT GGCCATGTGG TACGTTGTTT TGACGATGAC AACATTGTTC ACGTTGCAAA CAAAGTGGAT CCTGCTCGTG ATATCGAAGT GATCAACACC GAACTGGCTC TCGCCGACTT AGATAGTTTA GAGCGCGCCG TTATTCGTCA GCAAAAACGC GCTAAGGGTG GCGATAAAGA CGCTAAGTTT GAGGTAGAAG TCCTTGAGAA AATGCGTCCA GTGCTCGATG AAGCCAAAAT GCTGCGCTCG ATGGATCTTT CTAAGGAAGA ATTAGAAGCC GTTGCTTACT TAAACTTCTT AACCTTAAAG CCAACCATGT ATATTGCTAA CGTGGCCGAA GATGGTTTCG ACAATAACCC ACACTTAGAT GCAGTGCGTG CAATTGCTGA AAAAGAAAAT GCCATTGTGG TTTCAGTGTG CGCAGCGATT GAATCAGAAT TGGCTGAAAT GGACGCTGAA GAACGCGATG AGTTTATGGC AGACCTCGGG TTAGAAGAGC CAGGTTTAGA TCGCGTGATC CGTGCGGGTT ATCAGTTATT GAGCCTGCAA ACTTATTTCA CCGCGGGTGT AAAAGAAGTG CGTGCTTGGA CTGTCTCTGT CGGTGCAACA GCGCCACAGG CGGCGGGCGT TATCCATACT GACTTCGAAC GTGGCTTTAT TCGTGCGCAA GTGGTGGCAT TTGACGACTT TATTGCTTAC AAAGGTGAAG CGGGCGCTAA AGAGGCGGGT AAATTACGTG TTGAAGGCAA GACTTATATC GTTCAAGACG GCGATGTCAT GCACTTCTTG TTTAACGTAT AA
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Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPVPDPR LDALAAIVNP QRVLPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFDDD NIVHVANKVD PARDIEVINT ELALADLDSL ERAVIRQQKR AKGGDKDAKF EVEVLEKMRP VLDEAKMLRS MDLSKEELEA VAYLNFLTLK PTMYIANVAE DGFDNNPHLD AVRAIAEKEN AIVVSVCAAI ESELAEMDAE ERDEFMADLG LEEPGLDRVI RAGYQLLSLQ TYFTAGVKEV RAWTVSVGAT APQAAGVIHT DFERGFIRAQ VVAFDDFIAY KGEAGAKEAG KLRVEGKTYI VQDGDVMHFL FNV
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