| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1172 |
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| Symbol | holA |
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| ID | 1169001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1214181 |
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| End bp | 1215212 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343119 |
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| Product | DNA polymerase III, delta subunit |
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| Protein accession | NP_716797 |
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| Protein GI | 24372755 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTGTTT ATCCAGATCA ACTCTCCCGC CACCTCAATC CGCTTCACGC TTGTTATCTA
ATTTTTGGTG ATGATCCTTG GTTGCTCGAA ACCTCCAAGG ATCAGATCCG CCAAGCAGCA
AAACGCCAAG GCTTTGAAGA GCGCGTCCAA TTAATTCAAG AAACCGGTTT TAATTGGGGC
GACTTAACTC AGGAATGGCA GGCCATGAGC CTGTTTTCCA GCCGGCGCAT TATTGAGCTT
ACCTTGCCGA GCGCCAAGCC TGGAGCCGAC GGCTCTGCGG CGCTGCAATC TTTGCTGCAA
ACCCCCAGTC CAGATGTACT GCTGATCCTC GAAGGCCCAA AACTGGCCAG CGAGCAAACC
AACAGTAAAT GGTTCAAAAC GCTGGACAGC TTAGGAATTT ATTTACCCTG CACTACGCCA
GAAGGCGACC AATTCAGACG TTGGCTCGAC TCTCGTATCG CGCATTTTAA GCTTAATTTA
CAGCCCGATG CGCGCGCCAT GTTGTACTCC CTCTACGAAG GGAATTTACT CGCCGCCGAT
CAAGCCATGC AGTTGCTACA ACTGTTAAGT CCAAGCAAGC CTATCGGTGC TGACGAGTTA
AGCCACTACT TTGAAGATCA GTCCCGCTTT ACCGTGTTTC AACTCACCGA TGCACTGCTG
AATAATCGTC AAGACAGTGC CCAACATATG CTTGCCCAGC TTAACGGTGA AGGCACGGCC
ATGCCGATTT TACTTTGGGC TTTATTTAAA GAGCTGCAAT TACTACTCAG CCTAAAGAGT
GAACAGGCGC AAGGTTCGCC GCTCAATAGC CTTTTTGGTA AGCATCGAAT TTGGGATAAG
CGCAAACCGC TGTACCAAAC TGCCTTGCAG CGCTTAAGCC TTGCACAAAT CGAACATATG
CTCGCCTTTG CGTCCAAGCT AGAATTGAAC TTAAAGCAAT TAGGCCATGA AGATTGGACA
GGGCTCAGTC ATCTGTGCTT ATTATTCGAT CCTAAAGCCC ACAGTCATCT AGCCCATATC
AACTTAGATT AA
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| Protein sequence | MRVYPDQLSR HLNPLHACYL IFGDDPWLLE TSKDQIRQAA KRQGFEERVQ LIQETGFNWG
DLTQEWQAMS LFSSRRIIEL TLPSAKPGAD GSAALQSLLQ TPSPDVLLIL EGPKLASEQT
NSKWFKTLDS LGIYLPCTTP EGDQFRRWLD SRIAHFKLNL QPDARAMLYS LYEGNLLAAD
QAMQLLQLLS PSKPIGADEL SHYFEDQSRF TVFQLTDALL NNRQDSAQHM LAQLNGEGTA
MPILLWALFK ELQLLLSLKS EQAQGSPLNS LFGKHRIWDK RKPLYQTALQ RLSLAQIEHM
LAFASKLELN LKQLGHEDWT GLSHLCLLFD PKAHSHLAHI NLD
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