Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1169 |
Symbol | |
ID | 1168998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1212623 |
End bp | 1213093 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637343116 |
Product | rRNA large subunit methyltransferase |
Protein accession | NP_716794 |
Protein GI | 24372752 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTGC AACTTATCGC AGTGGGGACA CGGATGCCCG ATTGGGTCAC CCGCGGCTTT GAAGAGTACC AACGCCGCTT TCCTCGGGAT ATGGCGCTGG AACTTATCGA AATCCCTGCA GGCAAACGCG GAAAAAATGC TGACATAGTG CGCATCCTAC AAAAGGAAGG CGAGCAAATG TTAGCGGCGA TCCCTAAGGG CAATCACATT GTCACCTTAG ATCTTCCCGG CAAAAACTGG ACAACCCCAG AACTCGCGAG CGCCATGAAT AAGTGGCAAC TCGATGGCCG CGATGTGAGC TTGCTGGTTG GCGGCCCCGA AGGTTTAGCC CCCGCTTGTA AAGAAGCCGC CCATCAGAGT TGGTGCCTCT CGGCATTGAC CCTGCCCCAT CCGCTCGTGC GGATTGTGGT CGCCGAAAGC TTATACCGCG CGTGGAGCGT GAACACCAAT CACCCTTATC ACAGAGAATA G
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Protein sequence | MKLQLIAVGT RMPDWVTRGF EEYQRRFPRD MALELIEIPA GKRGKNADIV RILQKEGEQM LAAIPKGNHI VTLDLPGKNW TTPELASAMN KWQLDGRDVS LLVGGPEGLA PACKEAAHQS WCLSALTLPH PLVRIVVAES LYRAWSVNTN HPYHRE
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