Gene SO_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1164 
SymboldacA-1 
ID1168993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1206370 
End bp1207542 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content45% 
IMG OID637343111 
ProductD-alanyl-D-alanine carboxypeptidase 
Protein accessionNP_716789 
Protein GI24372747 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTG TAAAAAGTCC CATTAAGACA TTGCTGCTAA TTTCGAGTGT TTCTCTTCCT 
GTTTATGCTG CGCAGCCGAT TGTTACCCCT GATGCACCAA CCGTTGCCGC CAAGGCTTAC
GTCTTGATGG ATTATTATTC AGGCCAAATC ATTGCCGAAG AAAATGCCTA CGAAAGCTTA
AACCCTGCCA GCTTAACCAA AATGATGACC AGTTATGTCA TTGGTCAGGA AATTAAAGCA
GGTAACGTTT CCCCCGATGA TGATGTCACC ATCAGTAAAA ATGCTTGGTC AAAAAACTTC
TCTGACTCAT CAAAAATGTT CATCGAAGTG GGTAAAACCG TAAAAGTATC CGATTTAAAC
CGCGGGATCA TCATCCAATC AGGTAACGAT GCCTGTGTGG CGATGGCGGA ACATATCGCA
GGCACCGAAG GCGCTTTCGT CGACATGATG AACTCATGGT CAAAACAGCT AGGAATGCGT
GATAGCTATT TTGAAAACTC CCACGGACTT GATTCAGAAA ACCACAAAAC GACCGCCTAT
GATATGGCGC TTTTAGGCGC GGCACTGATC CGCGACGTAC CTGAAGAATA TCGCATCTAC
AGCGAAAAAT ACTATACCTT CAATGGCATC AAGCAATATA ACCGCAACGG CCTGTTGTGG
GATAACAGCA TGAATGTGGA TGGTATCAAA ACCGGTCACA CCTCTGGCGC GGGTTATAAC
TTAGTCGCGT CAGCCACAAA AGACGGTATG CGTTTAATTT CGGTTGTTAT GGGTACTCAA
AGTGAAGCCG CCCGTAAAGC AGAAAGTAAA AAACTGCTCA CCTATGGTTT CCGCTTCTTC
GAAACTGTTA CTCCATACAA GGCTGGTGAC AGCTTCGTTA CCCAACAAAT TTGGTACGGC
GATAAAAGCA CTGTGGATTT AGGTGTCGCG ACCGATACAC CAATCACCGT CAGCCGTGGC
CGCGCAAAAG ACTTGAAAGC AAACTTCGAG CTGACTAAGC CACTCGATGC GCCACTGAAA
AAAGGCGAAA CCGTGGGCCG CTTATACTTC CAGTTAGATG GTAAAGATAT TGCACAATTC
CCACTGGTCA CCTTACAAGA AGTCAACGAA GGCAGCTGGT TCAGTAAATT AGTCGATTAC
TTTAAGCAAC TGTTTTCTGG TTGGTTTAGC TAA
 
Protein sequence
MNFVKSPIKT LLLISSVSLP VYAAQPIVTP DAPTVAAKAY VLMDYYSGQI IAEENAYESL 
NPASLTKMMT SYVIGQEIKA GNVSPDDDVT ISKNAWSKNF SDSSKMFIEV GKTVKVSDLN
RGIIIQSGND ACVAMAEHIA GTEGAFVDMM NSWSKQLGMR DSYFENSHGL DSENHKTTAY
DMALLGAALI RDVPEEYRIY SEKYYTFNGI KQYNRNGLLW DNSMNVDGIK TGHTSGAGYN
LVASATKDGM RLISVVMGTQ SEAARKAESK KLLTYGFRFF ETVTPYKAGD SFVTQQIWYG
DKSTVDLGVA TDTPITVSRG RAKDLKANFE LTKPLDAPLK KGETVGRLYF QLDGKDIAQF
PLVTLQEVNE GSWFSKLVDY FKQLFSGWFS