Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1126 |
Symbol | dnaK |
ID | 1168958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1168751 |
End bp | 1170670 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343075 |
Product | molecular chaperone DnaK |
Protein accession | NP_716751 |
Protein GI | 24372709 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAAA TTATTGGTAT CGACTTAGGC ACAACAAACT CTTGTGTAGC TGTCCTCGAT GGTGGCAAAG CACGCGTATT AGAAAATGCT GAAGGCGATC GCACAACCCC GTCTATCATC GCTTACACAG ATGATGAGAC CATTGTGGGC CAACCAGCAA AACGCCAAGC TGTAACAAAC CCAAATAACA CATTCTTCGC GATCAAGCGT TTGATCGGTC GTCGCTTTAA AGATGACGAA GTTCAACGTG ACGTGAACAT CATGCCATTC AAAATCATTG CAGCCGACAA CGGTGATGCT TGGGTTGAGT CACGTGGCAA CAAAATGGCT CCACCACAGG TTTCTGCTGA AATCTTGAAA AAGATGAAGA AAACGGCAGA AGACTTTTTA GGTGAAGAAG TCACAGAAGC GGTTATTACT GTTCCTGCAT ACTTTAACGA TTCACAACGT CAAGCCACTA AAGATGCGGG TCGCATCGCG GGCCTTGAAG TGAAGCGTAT TATCAACGAA CCAACGGCCG CAGCACTGGC CTACGGTATC GACAAGAAGC AAGGCGACAA TATCGTTGCA GTGTACGACT TAGGTGGTGG TACGTTCGAT ATCTCGATCA TCGAAATCGA CAGCAACGAC GGCGACCAAA CCTTCGAAGT ATTAGCGACA AACGGTGACA CCCACTTAGG TGGTGAAGAC TTTGACAACC GTTTAATCAA CTACTTAGCT GACGAATTCA AGAAAGAGCA AGGCTTAGAT CTGCGTAAAG ATCCATTAGC AATGCAACGT CTGAAAGAAG CGGCTGAAAA GGCGAAGATT GAGCTTTCAA GCACCAACCA AACTGAAGTG AACCTGCCAT ACATCACTGC CGATGCAACA GGTCCTAAGC ACTTAGTGGT AAAAATCACC CGTGCTAAGT TAGAGTCACT GGTTGAAGAC TTAATCATTC GTACTTTAGA GCCATTAAAA GTGGCACTGG CTGACGCTGA CCTATCAGTA TCAGACATTA ACGAAGTGAT TTTAGTGGGC GGTCAAACCC GTATGCCTAA GGTTCAAGAA GCAGTGACTA ACTTCTTCGG TAAAGAACCT CGTAAAGACG TAAACCCAGA CGAAGCGGTA GCCGTAGGTG CTGCGATTCA AGCGGGCGTA CTGTCAGGCG ACGTGAAAGA CGTTCTGCTG TTAGACGTAA CACCACTGTC TCTGGGTATC GAAACCATGG GCAGCGTAAT GACCAAGCTG ATTGAGAAAA ACACGACTAT TCCGACTAAG GCACAGCAAG TGTTCTCAAC AGCCGATGAC AACCAAAGTG CAGTAACTAT TCACGTACTG CAAGGTGAGC GTAAGCAAGC GAGCGCGAAC AAGTCATTAG GTCAATTTAA CTTAGACGGT ATTGAGCCTG CACCACGTGG CATGCCACAA ATTGAAGTGA TGTTCGATAT CGACGCTGAC GGTATTCTGC ATGTTTCTGC CACCGATAAG AAAACCGGTA AGAAACAAAA CATCACCATC AAAGCTTCTT CTGGCTTAAG CGAAGAAGAA GTGGCGCAAA TGGTACGTGA CGCTGAAGCC CACGCTGAAG AAGACAAAAA GTTTGAAGAG CTAGTGCAAT CTCGCAACCA AGCTGACGGC TTAGTTCACG CAACTAAGAA ACAAGTTGAA GAGGCGGGCG ATGCACTGCC AAGCGAAGAC AAAGCGAAGA TTGAAGCGGC AATGAGCGCG GTTGAAACTG CTGTAAAAGG CAATGACAAA GAAGCCATTG AAAAAGCGAC TCAAGCGCTT ATCGAAGCCT CAGCAAAGCT GATGGAAATC GCTCAGGCTA AAGCTCAAAC TCAAGGCGGC GCACAAGAAG GTGCAGCTAA ACAGTCTAAC GCGACTGCCG ATGACGTTGT CGATGCTGAA TTTGAAGAAG TGAAAGACGA CAAGAAATAA
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Protein sequence | MGKIIGIDLG TTNSCVAVLD GGKARVLENA EGDRTTPSII AYTDDETIVG QPAKRQAVTN PNNTFFAIKR LIGRRFKDDE VQRDVNIMPF KIIAADNGDA WVESRGNKMA PPQVSAEILK KMKKTAEDFL GEEVTEAVIT VPAYFNDSQR QATKDAGRIA GLEVKRIINE PTAAALAYGI DKKQGDNIVA VYDLGGGTFD ISIIEIDSND GDQTFEVLAT NGDTHLGGED FDNRLINYLA DEFKKEQGLD LRKDPLAMQR LKEAAEKAKI ELSSTNQTEV NLPYITADAT GPKHLVVKIT RAKLESLVED LIIRTLEPLK VALADADLSV SDINEVILVG GQTRMPKVQE AVTNFFGKEP RKDVNPDEAV AVGAAIQAGV LSGDVKDVLL LDVTPLSLGI ETMGSVMTKL IEKNTTIPTK AQQVFSTADD NQSAVTIHVL QGERKQASAN KSLGQFNLDG IEPAPRGMPQ IEVMFDIDAD GILHVSATDK KTGKKQNITI KASSGLSEEE VAQMVRDAEA HAEEDKKFEE LVQSRNQADG LVHATKKQVE EAGDALPSED KAKIEAAMSA VETAVKGNDK EAIEKATQAL IEASAKLMEI AQAKAQTQGG AQEGAAKQSN ATADDVVDAE FEEVKDDKK
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