| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1108 |
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| Symbol | nqrF-2 |
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| ID | 1168941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1150843 |
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| End bp | 1152099 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343059 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | NP_716734 |
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| Protein GI | 24372692 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTC TTGGTATTTT TAAATCTACT CCGCTTGAGG TTTACCTCGG TGTGAGTATG
TTTACTGCTA TCGTCCTAGT CTTAGTGTTA GTGATTTTAT TCGCTAAATC TAAGCTAGTG
TCTAGCGGTG ACATCACGAT CGGCATCAAC GACGATCCTG AAAAAGCGAT TACAACCGGT
GCCGGTGGCA AGCTGTTAGG CGTGCTGGCG AACAACGGTA TCTTCGTATC GAGCGCCTGT
GGTGGCGGTG GTTCTTGTGG CCAATGTCGC GTGGTGGTTA AGTCTGGCGG CGGTGATATC
CTGCCAACAG AATTAGACCA CATCAGCAAG GGGGACGCCC GTAAAGGTTG TCGTCTGTCT
TGCCAGGTGA ACGTTAAGAA CGATATGGAA ATTGAACTTG ACGAAGAAAT CTTTGGTATT
AAGAAGTGGG AATGTGCTGT TATCTCTAAC GATAACAAGG CGACCTTCAT TAAAGAACTG
AAGCTGCAAA TTCCTGATGG TGAATCTGTT CCGTTCCGAG CAGGTGGTTA CATCCAGATC
GAAGCGCCTG CACACCATGT TAAATATGCT GATTTCGACG TACCGGCAAA ATACCGTGGC
GATTGGGAAC ACTTTGGTTT CTTCAAGTTA GAATCTAAAG TTGACGAAGA AACGATCCGC
GCTTACTCGA TGGCTAACTA CCCAGAAGAG TTTGGCATCA TCATGTTGAA CGTGCGTATC
GCGACGCCAC CACCACGTAA TTTGACGCTG CCTTGCGGTA AGATGTCATC TTACATTTGG
AGCTTAAAAG CGGGCGATAA AGTAACAATT TCTGGTCCAT TCGGTGAATT CTTCGCGAAA
GATACCGATG CTGAAATGGT GTTTATCGGC GGTGGTGCGG GTATGGCGCC AATGCGTTCG
CACATTTTCG ACCAACTGAA GCGTCTCAAG TCTAAGCGTA AGATGAGCTT CTGGTACGGT
GCACGTTCTA AGCGTGAAAT GTTCTACGTG GAAGACTTTG ACGGCTTAGC GGCTGAAAAC
GACAACTTTG TATGGCATGT GGCACTGTCC GATCCTCAAC CAGAGGATAA TTGGGATGGT
TACACTGGTT TCATCCATAA CGTACTGTAT GAAAACTACC TGAAAAATCA CGACGCTCCA
GAAGATTGTG AGTTCTATAT GTGTGGACCT CCAATGATGA ACGCGGCCGT GATCGGTATG
TTGAAAAATC TTGGTGTCGA AGACGAAAAC ATCCTGTTGG ATGACTTCGG CGGCTAA
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| Protein sequence | MDILGIFKST PLEVYLGVSM FTAIVLVLVL VILFAKSKLV SSGDITIGIN DDPEKAITTG
AGGKLLGVLA NNGIFVSSAC GGGGSCGQCR VVVKSGGGDI LPTELDHISK GDARKGCRLS
CQVNVKNDME IELDEEIFGI KKWECAVISN DNKATFIKEL KLQIPDGESV PFRAGGYIQI
EAPAHHVKYA DFDVPAKYRG DWEHFGFFKL ESKVDEETIR AYSMANYPEE FGIIMLNVRI
ATPPPRNLTL PCGKMSSYIW SLKAGDKVTI SGPFGEFFAK DTDAEMVFIG GGAGMAPMRS
HIFDQLKRLK SKRKMSFWYG ARSKREMFYV EDFDGLAAEN DNFVWHVALS DPQPEDNWDG
YTGFIHNVLY ENYLKNHDAP EDCEFYMCGP PMMNAAVIGM LKNLGVEDEN ILLDDFGG
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