Gene SO_1107 details

Gene Information

• Locus tag: SO_1107
• Symbol: nqrE-2
• ID: 1168940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1150188
• End bp: 1150796
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637343058
• Product: Na(+)-translocating NADH-quinone reductase subunit E
• Protein accession: NP_716733
• Protein GI: 24372691
• COG category: [C] Energy production and conversion
• COG ID: [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE
• TIGRFAM ID: [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACATT ATATTAGCCT GTTAATTCGC TCTGTTTTCA TTGAAAACAT GGCACTGGCC 
TTCTTCCTCG GTATGTGTAC TTTCTTAGCT GTATCGAAGA AAGTGACCAC TGCGATGGGC 
CTAGGGATTG CGGTAGTTGT AGTGTTAACT ATCTCTGTTC CTGCTAACCA AGTTATTTAC 
CAAGGGCTGT TAGCACCTGG CGCATTGGCT TGGGCCGGCG CACCTGAAGC TGACCTAAGC 
TTCTTGAAAT TCATTACCTT TATCGGTGTG ATCGCGGCTT TAGTTCAAAT TCTGGAAATG 
GCACTGGATA AGTACTTTCC TCCTTTGTAT AACGCGTTAG GTATCTTCTT ACCTCTGATC 
ACTGTGAACT GTGCGATTTT CGGTGCGGTA TCATTTATGG TTGAGCGTGA CTATAAACTG 
GGTGAAAGTC TGGTGTTTGG TTTCGGCTCT GGAGTAGGTT GGGCATTAGC TATCGTATTG 
ATGGCCGGTA TCCGTGAGAA GCTGAAGTAT GCCGATGTGC CTAATGGCCT GCGTGGTTTG 
GGTATTACCT TTATTACTGC TGGTTTAATG GCCTTAGGTT TCATGTCGTT TTCTGGTGTG 
TCTCTATAA 

 

Protein sequence

MEHYISLLIR SVFIENMALA FFLGMCTFLA VSKKVTTAMG LGIAVVVVLT ISVPANQVIY 
QGLLAPGALA WAGAPEADLS FLKFITFIGV IAALVQILEM ALDKYFPPLY NALGIFLPLI 
TVNCAIFGAV SFMVERDYKL GESLVFGFGS GVGWALAIVL MAGIREKLKY ADVPNGLRGL 
GITFITAGLM ALGFMSFSGV SL