Gene SO_1104 details

Gene Information

• Locus tag: SO_1104
• Symbol: nqrB-2
• ID: 1168937
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1147570
• End bp: 1148769
• Gene Length: 1200 bp
• Protein Length: 399 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637343055
• Product: Na(+)-translocating NADH-quinone reductase subunit B
• Protein accession: NP_716730
• Protein GI: 24372688
• COG category: [C] Energy production and conversion
• COG ID: [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB
• TIGRFAM ID: [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTGA AAGATTTTTT CGAACGTATT GAACCCGACT TTGAAAAAGG CGGTAAATAC 
GAAAAGTTTT ATGCCCTCTT TGAAGCGGCA TACACCATTT TTTATACCCC GGGCAAAGTG 
AATAATGGCA AGACCCACGT TCGCGATAAC CTTGACCTAA AACGTATGAT GATTACGGTT 
TGGGCCTGTG CTTTCCCTGC GATGTTTGTG GGGATGTACA ACGTAGGTTT ACAAGCTCAA 
ATAGCTTTAG TGGCTGGTTT TGCGACCCCT GATGTATGGC AAGTGAGCTT GTTTAGCATG 
TTCGGTACTG AACTGACGGC AAACTCTGGC TGGCCTGCGC TGATGTGGTA TGGCGCCTGT 
TTCTTCCTCC CTATCTATGC AGTGACGTTT GCAGTGGGCG GTATTTGGGA AGTGCTGTTT 
GCTGCTATCC GTGGTCATGA AGTGAACGAA GGCTTCTTTG TTACCTCTAT CCTGTTTGCC 
TTAACCCTGC CGCCAACGAT TCCATTATGG ATGGTGGCGA TGGGGATCAC CTTCGGTGTG 
GTTGTGGCAA AAGAGGTGTT TGGTGGCACG GGCCGTAACT TCTTAAACCC CGCACTTGCA 
GGCCGCGCCT TCTTGTTCTT TGCGTATCCG CTGAACATGT CCGGTGATAC CTCTTGGGTG 
GTGGCTGACG GTTACTCTGG TGCAACCGCC TTGAGCCAAG CCGCAGCCGG CAGTTTAGAT 
TATGCCTTTA ACCAAAACTG GTGGGATGCT TTCTTCGGTT TCATTCCAGG CTCTGTGGGT 
GAAGTATCGA CGCTGGCGAT TCTGTTAGGT GGTCTAGTTA TCATCTATAC CCGTATCGCA 
TCATGGCGCA TCGTGGGCGG TGTAATGGTG GGTATGATTG CCATTTCTAC GCTGCTTAAC 
GTTGTCGGTA GCGACACTAA CCCAATGTTT GCAATGCCTT GGTACTGGCA CTTAGTGTTG 
GGTGGTTTTG CCTTTGGCAT GATGTTTATG GCGACTGACC CAGTGTCTGC GTCATTCACT 
AACCAAGCTA AATGGGCCTA CGGGTTCTTG ATTGGTGCAA TGGCTGTGTT CATCCGCGTG 
ATTAACCCTG CGTTCCCAGA AGGCATGATG TTAGCGATTC TGTTTGCTAA CCTGTTCGCG 
CCATTGTTCG ACCACTTCGT GGTTCAGGCA AATATCAAGC GGAGGATTGC TCGTGGCTAG 

 

Protein sequence

MSLKDFFERI EPDFEKGGKY EKFYALFEAA YTIFYTPGKV NNGKTHVRDN LDLKRMMITV 
WACAFPAMFV GMYNVGLQAQ IALVAGFATP DVWQVSLFSM FGTELTANSG WPALMWYGAC 
FFLPIYAVTF AVGGIWEVLF AAIRGHEVNE GFFVTSILFA LTLPPTIPLW MVAMGITFGV 
VVAKEVFGGT GRNFLNPALA GRAFLFFAYP LNMSGDTSWV VADGYSGATA LSQAAAGSLD 
YAFNQNWWDA FFGFIPGSVG EVSTLAILLG GLVIIYTRIA SWRIVGGVMV GMIAISTLLN 
VVGSDTNPMF AMPWYWHLVL GGFAFGMMFM ATDPVSASFT NQAKWAYGFL IGAMAVFIRV 
INPAFPEGMM LAILFANLFA PLFDHFVVQA NIKRRIARG