Gene SO_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1081 
Symbol 
ID1168917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1121736 
End bp1122929 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content40% 
IMG OID637343036 
Producthypothetical protein 
Protein accessionNP_716708 
Protein GI24372666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAT TAAGAGTTTT TGTGTCATCC ACATGTTACG ACCTGTCTGT TATTCGATCT 
CAGCTGAGAA TTTTTATACA AAGTCTGGGG CACGAACCCC TGATGAGCGA TTACAGCGAC
CTTCTGTATG ACCCTCGCCT TCATACGCAT ACAAGTTGTG TCGATGAGGT AGCTACAGCG
GATATTGTGG TGCTTATTGT CGGCGCAAGA TTCGGTGGTA AGACGGTTCC AGAGGCACTT
GCGAAGCTAG ATTTTGATTT GCTTAAGAAA GAAAGTAAGA GCACAGAGTC TCTGATTAAA
AAGGAAAATT TATCTGTAAC GCAGCTGGAA ATTCTTAAAG CCGTCGAATC TGGAATACCA
GTTTTTACAT TTGTAGACTC CTCAGTTTGG CATGATCACG CCCTTTACGA AAAAAACAAA
GATAAACCAA TAATTAATGA TATTTCCTTT CCATCAATAG AAAAGGCTGA AACAGCTTCA
TTTATTTTTG AGTTTATTAA TTTTCTCAGG CATAGAGCGA GAGGTAATAG CGTTTATACA
TTTTCCAAGC TTCAGGACAT TGAGGATACA CTAAGGCGGC AGTGGTCTTC ATTATTTCAA
AAGCTGATTC AAGAGCAGAG AAGCAAAGCT TTTGAGGCAA AACGTTTAGA TAATTTGACA
GAACAATTTG AGGATCTAAA AACCGCAATT CTTACTTCAA TTGGAACAAC CAATGAGAGG
GATGTGGCTA GAGGTGTGGT TCGGTTTAGA AGATTGATAG ATTTCGTAAG GTCATTGGGT
CTAAAAGACC ACAACTTCCT AATCCGAGGG CATCATCCGT GGGATGAACT ACTACATTAC
GCTGAAATCG AAAAAGTTCT TGATGCGGCA GAGTTGCCTG AGGAATTCAT TTTCCACAGG
AGAAACTTTG GCTCGCGCCC AAGAATGTTT TTAATTAAAA ATGACGGTAC TTTTTTTGAG
CTAAGAACAT CTCCAGATTT CTTCCACAGT CTCTCTTTAG AATGGGAAGC TTTTATGGAT
CTTCCCGAGG ACACTCGTGA AATCATTGTA GACGCGCTTA GTGAGATGAG GCCAGGAATG
GGGCCTTTGA GATATATTCG AGAACCGTTT GATTACCACG TGGATAAGTG GATTCATCAA
GAGCGTTTAT TGAAAGACAT AGATGATTCT GATCATGAGT CAAGTCATTC ATAA
 
Protein sequence
MAGLRVFVSS TCYDLSVIRS QLRIFIQSLG HEPLMSDYSD LLYDPRLHTH TSCVDEVATA 
DIVVLIVGAR FGGKTVPEAL AKLDFDLLKK ESKSTESLIK KENLSVTQLE ILKAVESGIP
VFTFVDSSVW HDHALYEKNK DKPIINDISF PSIEKAETAS FIFEFINFLR HRARGNSVYT
FSKLQDIEDT LRRQWSSLFQ KLIQEQRSKA FEAKRLDNLT EQFEDLKTAI LTSIGTTNER
DVARGVVRFR RLIDFVRSLG LKDHNFLIRG HHPWDELLHY AEIEKVLDAA ELPEEFIFHR
RNFGSRPRMF LIKNDGTFFE LRTSPDFFHS LSLEWEAFMD LPEDTREIIV DALSEMRPGM
GPLRYIREPF DYHVDKWIHQ ERLLKDIDDS DHESSHS