Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1070 |
Symbol | katB |
ID | 1168907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1109981 |
End bp | 1111441 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343026 |
Product | catalase |
Protein accession | NP_716697 |
Protein GI | 24372655 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0753] Catalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAC AGTATTTAAC CAGCCAGAGC GGTTCCCCGA TTGCGGATGA TCAAAACTCA TTGTCAGCGG GTGAACGTGG TCCTTTACTC CTGCAAGATT GGCATTTAAT TGAAAAGCTT GCTCATTTTA ACCGTGAGCG TATTCCAGAG CGTGTGGTAC ATGCTAAAGG GACTGGCGTA TACGGGACTT TCACTCTGAC CAAAGACTTG AGTGATTACA CCATTGCCGA TCACTTCAAT GGTGTGGGTA AGCAAACTGA AACTTTTGTG CGTTTCTCCA CCGTAGGCGG TGAAATGGGC TCTGCCGATG CCGAGCGTGA TCCACGTGGT TTTGGTCTGC GCTTTTATAC CGCTCGCGGT AATCACGACA TCGTGGGTAA TAACACGCCG ACATTCTTTT TGCGTGATGG CATTAAGTTC CCAGACTTTA TTCATACCCA AAAGCGTAAC CCATTGACTA ACCTTAAAGA TCCACAAGCG ATGTGGGATT TTTGGTCGCT CAACCCTGAA GCTATGCATC AGGTGACTAT TCTGATGTCA GATCGTGGTA TTCCGGCAAA CTATCGCCAA ATGCACGGTT ATGGTTCGCA TACCTTCTCT TTTTGGAATG CTAAAGGTGA GCGTTTCTGG GTGAAGTTCC ACTTCAAATC GCAGCAAGGC GTAGTGAACT TAAGCAACGA ACAAGCTGAC AAGTTAAAAG GCATTGATCC TGATTCTTCT CAGCGCGATA TGGTGGTAGC TATCACTGAT GGTAACTTCC CTCGTTGGAC GGTGAATGTG CAGATCATGC CTGAGGCCGA TGCTAATACT TACCATATCA ATCCGTTTGA TTTAACTAAG GTTTGGCCAC ATGGCGATTA TCCGTTAATT GAGATTGGTG TATTAGAACT GAACCGTTTA CCGCAAAACT ATTTTGCGGA AGTCGAGCAA GTGGCCTTAG CACCGAGCAA CTTAGTACCA GGTGTGGGTG CATCGCCTGA TAAGATGTTA CAAGCGCGTT TATTCGCCTA TGCTGATGCG CAGCGTTACC GTATTGGCGC GAATTACAAC CAATTGCCAG TAAACTGTCC ACATGCGGCT AAAGCCAATC ATCATCAACG TGCAGGCGCA ATGGCAGGAA CTCAATGTCC TTACCATGGC AGTCAAACAG GTGGTGATGC TTCTGCCAAC TATGGCCCTA ATAGCACAAT AGGCGCCTTG GTAGAACCGG CAAACTTTGC CGAGCCACCA CTGCGTTTAG ACGGAGAAAC GGCGCGTTAC AGCCGTTACA ATCAGGATGA TTACACTCAA GCGGGTAATT TGTACCGTAT CTTCAGTGAA GAGGAAAAAG CTCGCTTAGT GGCAACCATC TCAGGTTCGT TGCGTCAGGC AAGCATGGAT GTACAGCAAC GTATGCTGGC ACATTTCCAA AAAGCTGATG CTGATTATGG TCAACGTATC AAAATGGCGC TGGGGTTATA A
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Protein sequence | MSQQYLTSQS GSPIADDQNS LSAGERGPLL LQDWHLIEKL AHFNRERIPE RVVHAKGTGV YGTFTLTKDL SDYTIADHFN GVGKQTETFV RFSTVGGEMG SADAERDPRG FGLRFYTARG NHDIVGNNTP TFFLRDGIKF PDFIHTQKRN PLTNLKDPQA MWDFWSLNPE AMHQVTILMS DRGIPANYRQ MHGYGSHTFS FWNAKGERFW VKFHFKSQQG VVNLSNEQAD KLKGIDPDSS QRDMVVAITD GNFPRWTVNV QIMPEADANT YHINPFDLTK VWPHGDYPLI EIGVLELNRL PQNYFAEVEQ VALAPSNLVP GVGASPDKML QARLFAYADA QRYRIGANYN QLPVNCPHAA KANHHQRAGA MAGTQCPYHG SQTGGDASAN YGPNSTIGAL VEPANFAEPP LRLDGETARY SRYNQDDYTQ AGNLYRIFSE EEKARLVATI SGSLRQASMD VQQRMLAHFQ KADADYGQRI KMALGL
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