Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1020 |
Symbol | nuoB |
ID | 1168862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1059197 |
End bp | 1059871 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637342982 |
Product | NADH dehydrogenase subunit B |
Protein accession | NP_716648 |
Protein GI | 24372606 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTACA CCCTGACCCG GATTGACCCG GATGCGCCCG TTGAGCGCTA CCCCCAGGAG CAGCGCCAAA CCGTCGATGA TCCGCTAGCA CAAGAAGCAA CACGCGGCAT CATGATGGGC CGCCTTGAAG AGGTGCTGAA AGACACCGTC AACTGGGGCC GCAAGAACTC CCTCTGGCCT TACAACTTCG GTATCTCCTG CTGTTATGTG GAGATGTGTA CCGCCTTCAC CTCTCCCCAC GATGTGGCCC GCTTCGGCGC CGAAGTGATC CGCGCTTCGC CCCGGCAGGC CGATTTTATG GTGATTGCCG GGACGCCCTT TATCAAGATG GCGCCGGTCA TCCAACGTTT ATACGAGCAA CTACTCGAGC CTAAGTGGGT GATCTCCATG GGGGCCTGTG CCAACTCGGG CGGCATGTAT GACATCTACT CGGTGGTGCA GGGGGTGGAC AAGTTTCTGC CGGTCGACGT TTACATTCCA GGCTGCCCAC CCCGTCCCGA AGCCTTTTTG CAAGCCCTGA TGCTGCTGCA GGACTCCATC GGCAAGGAGC GCCGCCCGCT CTCTTGGGTG GTGGGCGATC AAGGGATTTA CCGTCCCCAA ATGCCAGCCG AAAAAGAGCG CAAGCGCGGC GAACGGATCA ACGTGACCAA CCTGCGCACG CCGGATGAGA TTTAA
|
Protein sequence | MKYTLTRIDP DAPVERYPQE QRQTVDDPLA QEATRGIMMG RLEEVLKDTV NWGRKNSLWP YNFGISCCYV EMCTAFTSPH DVARFGAEVI RASPRQADFM VIAGTPFIKM APVIQRLYEQ LLEPKWVISM GACANSGGMY DIYSVVQGVD KFLPVDVYIP GCPPRPEAFL QALMLLQDSI GKERRPLSWV VGDQGIYRPQ MPAEKERKRG ERINVTNLRT PDEI
|
| |