Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0959 |
Symbol | pepA-1 |
ID | 1168804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 993944 |
End bp | 995479 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637342925 |
Product | cytosol aminopeptidase |
Protein accession | NP_716588 |
Protein GI | 24372546 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0260] Leucyl aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA AGAATAAATT TTTGTTAAGC GTTATGGCTC TGGCGTGCCT TAACTCTCTC AATGCTAACG CCGAAATCTT TAGTTTTGAC ACTCGTAATT CACTTAATTC CGATACCTTA GTACTGTTCC ACAGTGCTGA TTCAACAACC TATAGTCTCG ATTTTTTGCC CCAGTCGACC CAAGATCAAC TCAATCTTGC CGTGGCCGAC AATAGTTTTT CGGGTAAACG CGGCGAAGTA TTAGAGATTT TAGTACCGAG CGAAATCGAT GCCAAGCGTG TGTTACTCGT TGGGATTGGC GATGCCAAAA CCTTAACGCC AGGTGAAATC AACGCCTTAG GTGGCAACAT TGCCGCCAAA CTTGAAACCG TGCCGCAAGC CACGGTACGA GTGCTGACCC AAGGCCTCAA TAACGCGCCT CTGTTTGGCT CAGAACTGGC CCACGGCATC GAGCTGCGCA GCTATCGCTA CACCCAATTT AAAGCGAGCA ATCGCGTTGA AAAAAACTAT CAAATCGGCG TTGATGATTT AAGCCTCAAC CAAAAACACC ATAAGAATCT GCAAGCCGTT GAAGCAGGTG TGTTTTTGGC GCGGGATCTG ACCAATGCAC CTGCGGGAAA CATGTATCCC GAAAGCTTTG CTAATGAGGC TCGTAAGCTC AAATCCTTGG GCGTTAAAGT CACCGTACTG GAAGCGAAAG ATATTGAACG CCTAAACCTT GGCGCCTTAG CCGCAGTAGG TAAAGGCAGC GAGCGCCCAC CTAAGCTGGT TGTCGCCCAC TGGCCCGGCA GTAAAGAGGC GCCAATCGCC CTCGTCGGCA AAGGTATAAC CTTCGACTCT GGCGGTTACA ACATAAAAGC GACGGGCACC TCCATCGCGC GGATGAAGTC CGATATGGCG GGCGCAGCAA CTGTGCTTGG CACCGTAAAA GCCATGGCGA TTCAAAAGGC ACCAGTAAAC CTGGTCGCCA TTATGCCTAT GGCTGAAAAT ATGGTGTCGG GCCATGCGAT GATCCCTGGC GATGTGATCA CCACGGCGCA GGGACTGACT GTTGAAGTAC TCAACACCGA TGCCGAAGGC CGTTTAGTGT TAGCCGATGG CCTATGGTAT GCCCGTGAAA ACTACCGGCC ATCGGTAATC ATCGATGTTG CCACCCTTAC AGGCTCAAAA GTCAGTGCGC TAGGCACGGT TTATGCGGGA TTATTTACCG ATTCAGAGCC GCTAGTGCAG CAGCTCACCT TTGCAGGCCA GCAGGTGGGT GAAAAAGTTT GGCGCTTGCC GTTAGATCAG GCCTACGACG ATGAACTCAA ATCCACCATC GCTGATTTGA AGAATACCGG TAAGGAAGGC AGCGCGGGAG CATCTGCGGC AGCTATGTTC CTTAAACGCT TTGCGGGCGA TCAGCCTTGG GCGCATCTTG ATATTGCTGG TCATGCCCTC ACCGCAACTG ATACCGCAGT AGTCCCAGCA GGTGCAACAG GTTATGGCGT GCGTTTACTT AGCACTTGGC TAACCCAGCC CAAAGCGCAA AACTAG
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Protein sequence | MKNKNKFLLS VMALACLNSL NANAEIFSFD TRNSLNSDTL VLFHSADSTT YSLDFLPQST QDQLNLAVAD NSFSGKRGEV LEILVPSEID AKRVLLVGIG DAKTLTPGEI NALGGNIAAK LETVPQATVR VLTQGLNNAP LFGSELAHGI ELRSYRYTQF KASNRVEKNY QIGVDDLSLN QKHHKNLQAV EAGVFLARDL TNAPAGNMYP ESFANEARKL KSLGVKVTVL EAKDIERLNL GALAAVGKGS ERPPKLVVAH WPGSKEAPIA LVGKGITFDS GGYNIKATGT SIARMKSDMA GAATVLGTVK AMAIQKAPVN LVAIMPMAEN MVSGHAMIPG DVITTAQGLT VEVLNTDAEG RLVLADGLWY ARENYRPSVI IDVATLTGSK VSALGTVYAG LFTDSEPLVQ QLTFAGQQVG EKVWRLPLDQ AYDDELKSTI ADLKNTGKEG SAGASAAAMF LKRFAGDQPW AHLDIAGHAL TATDTAVVPA GATGYGVRLL STWLTQPKAQ N
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