Gene SO_0906 details

Gene Information

• Locus tag: SO_0906
• Symbol: nqrE-1
• ID: 1168752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 932943
• End bp: 933551
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637342874
• Product: Na(+)-translocating NADH-quinone reductase subunit E
• Protein accession: NP_716536
• Protein GI: 24372494
• COG category: [C] Energy production and conversion
• COG ID: [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE
• TIGRFAM ID: [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACACT ATATTAATCT GTTTATACAG GCCACTTTCT TAGACAACAT GGCGCTGTCG 
TTCTTCCTCG GTATGTGTAC CTTCTTAGCG GTGTCTAAAA AGGTGTCGAC CGCCTTCGGC 
TTAGGCGTTG CAGTTATTGT GGTAATGACC TTAGCCGTGC CCTTAAACCA ACTGATCTAT 
GCGAAGGTGT TAGCACCTGG CGCTCTGGCT TGGGCGGGTA TGCCTGGCAT CGATTTAAGC 
TATCTGCAAC TGATCACCTT TATCGGTGTG ATTGCAGCCT TAGTGCAAAT TTTGGAAATG 
TTTTTAGATA AATACATTCC AAGCCTGTAT GACTCACTTG GGATCTTCTT GCCACTGCTC 
ACCGTAAACT GCGCGATTTT TGCTGGGGTG ATCTTTATGG CTAACCGCGA TTACAACTTT 
GCCGAATCGG CGGTATTTGC CATGGGTTCG GGCACAGGTT GGGCGTTGGC GATTGTGATG 
CTGGCTGGAC TTCGTGAGCG CATGAAGTTC CATGCGATTC CCGAAGGCTT ACAGGGGATT 
GGTATCACCT TTATTACCAC AGGGTTGATG GCGCTAGGCT TTATGTCTTT CTCGGGGATC 
TCGCTGTAA 

 

Protein sequence

MEHYINLFIQ ATFLDNMALS FFLGMCTFLA VSKKVSTAFG LGVAVIVVMT LAVPLNQLIY 
AKVLAPGALA WAGMPGIDLS YLQLITFIGV IAALVQILEM FLDKYIPSLY DSLGIFLPLL 
TVNCAIFAGV IFMANRDYNF AESAVFAMGS GTGWALAIVM LAGLRERMKF HAIPEGLQGI 
GITFITTGLM ALGFMSFSGI SL