| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0820 |
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| Symbol | |
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| ID | 1168671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 834972 |
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| End bp | 836189 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342794 |
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| Product | HlyD family secretion protein |
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| Protein accession | NP_716451 |
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| Protein GI | 24372409 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CCTCAAAGCG TAAATTGATA TTGATCCTAA GCGGCCTCAT CCTTCTCGGG
GGCGGCGCTT ATTTTCTGTT GCATAAACCC GAGGCGGCAC CAAGCTATGT GACGGAGCCC
GTCAGGCGAG GCGATATTGA AAACTCGGTG CTCGCCAATG GCATGTTGCA GGCTTCTAAA
TTGGTGAGTG TGGGCGCGCA AGTTTCAGGG CAAATTTTGA GTTTGTCCGT AGCGCTTGGC
GAAGAGGTGA AAAAGGGCGA TCTTATCGCG CAAATCGACA GCCTTGCCCA GCAAAACAAC
TTGCAAAATG CGCTGGCTTC CCTAAAAAAC ATCAATGCCC AGTACCGAGC GAAGCAGGCG
CAAATACGTC AGGCAAAGCT CGAATATACC CGTCAGCAGC AAATGCTCGC CGATAAGGCC
AGCTCCCGCG CTGACTTTGA AGCCGCCGAA GCCACGCTCA CGGTTTATCA GGCAGAGCTT
GAGCAGTTAG AGGCGCAGAA ACAACAGGCT GAGATTAATG TCGACAGTGC CAGAATCGAT
TTAGGTTATA CCAAAATCAC TGCGCCTATG GATGGCACTG TCGTTTACTC TGCGGTTGAA
GTGGGTCAAA CCGTAAACGC CAATCAAACC ACGCCAACCA TAGTCGAGAT GGCGCAGCTC
GATACCATGA CGGTCAAGGC GCAGATCTCC GAAGCCGATA TCGTTAATGT GCGCCCCGGA
CAGCCAGTGT ATTTCACTAT TCTTGGCAGA CCTAACCATC CCTATCGCGG CAGCTTAAGG
GCTATTGAGC CTGGCCCGAC GTCAATGGAT GGTGACGATA GCAATATGAG CTCCAGCGAT
TCAGACGCCA TTTATTACCA TGGCCTGTTC GATGTCGAAA ACCCCGACCG TACCCTACGC
ATTGGGATGA CGGCGCAGAT CTCGATTGTA CTCGCCAAGT CTGATGATGC GCTGTTAGTG
CCATCGCAAG TGCTCAAGGT TAAACCAAAG GATAAAGCAG CCTCGCCAGC GGAACGTAAG
TCCCGTGGGC CGCAATATCA AGTGCCTGTG CTGGTGGACA ACCAAGTGCA ATATGTGGAT
GTCACCGTCG GGATTAATAA TAAAATCAAT GCTGAAATTC TTTCTGGTTT AAAGGAAGGC
GACCAAGTAG TGCTCGGGAT GCCTTCGTCC GATGATGGCA GCGCGCGTAT GCGTCGCCCG
CCTAGTGTGA GGTTTTAA
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| Protein sequence | MKKSSKRKLI LILSGLILLG GGAYFLLHKP EAAPSYVTEP VRRGDIENSV LANGMLQASK
LVSVGAQVSG QILSLSVALG EEVKKGDLIA QIDSLAQQNN LQNALASLKN INAQYRAKQA
QIRQAKLEYT RQQQMLADKA SSRADFEAAE ATLTVYQAEL EQLEAQKQQA EINVDSARID
LGYTKITAPM DGTVVYSAVE VGQTVNANQT TPTIVEMAQL DTMTVKAQIS EADIVNVRPG
QPVYFTILGR PNHPYRGSLR AIEPGPTSMD GDDSNMSSSD SDAIYYHGLF DVENPDRTLR
IGMTAQISIV LAKSDDALLV PSQVLKVKPK DKAASPAERK SRGPQYQVPV LVDNQVQYVD
VTVGINNKIN AEILSGLKEG DQVVLGMPSS DDGSARMRRP PSVRF
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