Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0810 |
Symbol | rbsK |
ID | 1168662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 821797 |
End bp | 822708 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637342785 |
Product | ribokinase |
Protein accession | NP_716441 |
Protein GI | 24372399 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATA TTCTCGTTAT CGGCAGTGCC AACGCCGATC ATGTTATGAA CTTTGAGTAT TTGCCTGTTC CTGGACAAAC CTTAAAAAGC CGAAGCTATC GGTTAGAACA TGGTGGCAAG GGCGCCAATC AGGCGGTCGC TTGCGCCCGG CTGTGCCTTC CCGATTCTCG CGTAGATTTT ATCTGCCACT TAGGCCAAGA CAGCATTGGA AATGAAATGC GCGACAGTTG GCTCAAGGAT GGCATCCAAG CCGAGGGCAT CACCCTAGTC GACAATGTGA GCACTGGCAC GGCGATGATT TTTGTCGCCG ATAATGGCGA AAACGCCATC GGGATCGCCG CTGGGGCCAA TGCCCATCTC ACCCCCCTTG AATTAGAAAA ACATTACGCC CTGTTTGCCA ATGCGCAATA CCTGCTGATC CAGCTCGAAA CACCCACCGA AACAGTTAGC AATGCACTCC AAATGGCTAA ACGTCTTGGT ATAACCACAG TTCTCAATCC AGCGCCAGCG GCCACTCAGG AGCTGGATTA CCTGAAATGG GTCGACATTA TTACCCCCAA TGAAACCGAG GCCGAAGCAT TAACGGGTAT TGAGGTCAAG CATGAAGAAG ATGCCAAACT CGCGGCCCAA TGGCTACATC AACAGGGGAT TACCACTGTG GTGATTACCT TAGGTAGCAA AGGCGCATTT ATTAGCAGCC CTGGTTTTAC CGGGCTAATC CCCGCCCTCA CTGTGCAAGC CATCGATACG GTCGCCGCTG GTGATACCTT CAACGGCGCG CTCGTTGTCG GCTTAAGTGA AGGTATGTCA ATTGCCGCCG CCGTCAGCTT TGCCAACGCA GCATCGGCGA TTACGGTTAC CCGTGAAGGT GCACAGCGCG CCATCCCCTA CCGCAGCGAA GTATCGCGTT AA
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Protein sequence | MSHILVIGSA NADHVMNFEY LPVPGQTLKS RSYRLEHGGK GANQAVACAR LCLPDSRVDF ICHLGQDSIG NEMRDSWLKD GIQAEGITLV DNVSTGTAMI FVADNGENAI GIAAGANAHL TPLELEKHYA LFANAQYLLI QLETPTETVS NALQMAKRLG ITTVLNPAPA ATQELDYLKW VDIITPNETE AEALTGIEVK HEEDAKLAAQ WLHQQGITTV VITLGSKGAF ISSPGFTGLI PALTVQAIDT VAAGDTFNGA LVVGLSEGMS IAAAVSFANA ASAITVTREG AQRAIPYRSE VSR
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