| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0796 |
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| Symbol | |
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| ID | 1168650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 808860 |
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| End bp | 809771 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637342773 |
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| Product | GGDEF family protein |
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| Protein accession | NP_716427 |
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| Protein GI | 24372385 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATGATCA ATATTGCACA AATGGCGTTA GTACTTCACT CCTTGCCGGA TCCTGCTTTT
GTGATCACCC AAAGTGGACG CTATGTTGCC GTTTTTGGCG GTAAAGATGA TCGTTATTAC
CACGATGGCA GCGGATTAGT CGGCCTATAC ATTAGCGATG TATTAAGTGA AAATAAGGCA
GCCTACTTCC TTAGCATTAT TGAAAAAGCA TTAAATAGCC GTAATTTACT GATCGAAGAA
TATGAACTCA GTAATAAGGA TGTTAAAGGC TTACCCGATC AAGGTCCCAC CGAACCTATT
TGGTTTGAGG GGCGTATTCA GGCATTGGAT TTTCTTGTCG ATAACGAACC CGTAGTACTT
TGGGTTGCCA GTAATATCTC CAAAAGACAT GACCTTGAGG TGCAACTGCG ACAATTAAGC
GATACCGATC AGCTTACCGG ACTGTATAAT CGCCACAGAC TTGAACGCGA CTTAAACTAC
CTCTTCGATA CCTATTGCCG TCACCATATT CCGGCTTCCA TATTAATGCT GGATCTGGAT
CATCTAAAAT TGATCAACGA TCAGCTTGGC CACCATGCGG GTGACAATAT CATCATGACG
GTCGCCAACA CCTGCAAACA ACAATTTAGA AAAACCGACA GCGCCTATCG TTTTGGTGGC
GATGAATTTG TGATTGCCTT GCCCGGTGTT GAATATACTC AAGCCATTGT GTTTGCAGAA
TTTCTCTGTG ATTGTTGCTT CAAAGAATTA CAAAAACATG CCGTAAAAGG ACTCTATGCC
ACCGTCAGCA TTGGTGTCGC CACCATTCAG GCAAACGATA AATCCTACGA AGACACCTTA
AAACGCGCCG ATGCCGCGCT ATATCAAGCC AAGCGGGATG GTAAGAATCG CGTAATAGCC
AATACGGCGT AA
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| Protein sequence | MMINIAQMAL VLHSLPDPAF VITQSGRYVA VFGGKDDRYY HDGSGLVGLY ISDVLSENKA
AYFLSIIEKA LNSRNLLIEE YELSNKDVKG LPDQGPTEPI WFEGRIQALD FLVDNEPVVL
WVASNISKRH DLEVQLRQLS DTDQLTGLYN RHRLERDLNY LFDTYCRHHI PASILMLDLD
HLKLINDQLG HHAGDNIIMT VANTCKQQFR KTDSAYRFGG DEFVIALPGV EYTQAIVFAE
FLCDCCFKEL QKHAVKGLYA TVSIGVATIQ ANDKSYEDTL KRADAALYQA KRDGKNRVIA
NTA
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