Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0621 |
Symbol | |
ID | 1168487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 648335 |
End bp | 649663 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637342612 |
Product | sensor histidine kinase |
Protein accession | NP_716254 |
Protein GI | 24372212 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTCTA TTCGCACTAA GCTCAGTTTA TGGTTAACGG GCTTATTGGT GTTAGGCACA GTGATTGGAC TCATATTATT TGAGTCCATG CTGCGCCAAG CGTTTCATGA CTCGATTATC AATCGCTTAG AAGAAGATTT AGAGCACATT ATGCTGGCGA CCCATTTCAA TAATGGGGAG ATCCATATCG ATCAAAGCCA ACTATCAAGC TTTTACCGCC CCGCCTATTC GGGGCGTTAT TTCCAGCTCA ACCTCCCCAA TGAAGTGATC CGCTCCCGTT CACTTTGGGA TATGCAGCTC GATATCGAGC CTTTAGCACC AAGTCAAACC CGAGTTTGGC AGGCAAAGGG ACCCAAAAAC AATGACATGC AGTTATTATC CCTAGGATTA AATTCCAGCA GCGCGAATGT AACCGCGACA CTCACCGTGG CGCAGGACTT GAGTATCGGT CGACGGGTAT TTAGTGAAGT CTACGGCACT AAGCTTGGGG TTAACCTTGC AATGTTAGTG GCGATGATCG CGGGGATCTT CTTAATCCTG CGCCAATCGT TTAAGCCCGT GAAACAAATC CAACATGCGC TATCACGCCT ACAAGAAGGT GAGATTAAGG CCTTGGAGTT AAACAATATT CCACCGGAAG TTCAGCCGCT GGCCAAGACC TATAACGAAT TACTGGAATA CACCGCCAAG CAAATTGAAC GCAGCCGAAA TAACTTAGGT AATTTAAGCC ACGGCCTAAA AACCCCACTG GCCGTAATGC AGCAACAGGT CGAAGCCTTA GGCCTTAAAG ATCCCGAGAC CGCTATGGCG CTGCAACAAC AGCTCGATGC GATCCATAAA ATGGTCGAAC GTAAGCTCGC CGCAGCGCGG ATCACTGGCG ATATGTTGCC CGCAGCGCAG TTAGTGGTCC CAAGGGATCT CCATAGCCTC GCCAATACCC TAAACAAAGT GCATAGAAGC AAAAACATCA GCTGCAACTT TGAGCTTGAC CCGAGTATCC AGCGTCTACC CATCCATCGG GAAGATGGTA TGGAGCTTTT AGGTAATCTG TTAGATAACG CCTTTAAATG GGCGGATAGC CAAGTCACAG TCAAACTTTG GAAAGCACAA AACAAACTGT ATCTCAGCAT TGATGATGAT GGCCCAGGCG TTGCCGATGA TGAACTGGAT AAACTCACCC AAAGGGGAAC TCGACTCGAT GAATCGGTCA TGGGCCATGG TTTAGGTTTA TCGATAGTCA AGGAAATCGC CGAGCAATAT GGCATTGAGC TTAAATTTAC CCACAGCCGC CGATTATCTG GACTCTGTAT TGAGCTGGTA TTGAGTTAA
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Protein sequence | MISIRTKLSL WLTGLLVLGT VIGLILFESM LRQAFHDSII NRLEEDLEHI MLATHFNNGE IHIDQSQLSS FYRPAYSGRY FQLNLPNEVI RSRSLWDMQL DIEPLAPSQT RVWQAKGPKN NDMQLLSLGL NSSSANVTAT LTVAQDLSIG RRVFSEVYGT KLGVNLAMLV AMIAGIFLIL RQSFKPVKQI QHALSRLQEG EIKALELNNI PPEVQPLAKT YNELLEYTAK QIERSRNNLG NLSHGLKTPL AVMQQQVEAL GLKDPETAMA LQQQLDAIHK MVERKLAAAR ITGDMLPAAQ LVVPRDLHSL ANTLNKVHRS KNISCNFELD PSIQRLPIHR EDGMELLGNL LDNAFKWADS QVTVKLWKAQ NKLYLSIDDD GPGVADDELD KLTQRGTRLD ESVMGHGLGL SIVKEIAEQY GIELKFTHSR RLSGLCIELV LS
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