Gene SO_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0606 
SymbolhflC 
ID1168473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp632545 
End bp633438 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content43% 
IMG OID637342598 
ProducthflC protein 
Protein accessionNP_716239 
Protein GI24372197 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAGAT TAAGTATTGT TCTGATCGCC GTTATATTAG GCATTGGTTT GTCATCTGTG 
ATGGTGGTTA ACGAAGGCGA ACGTGCGATT GTGGCGCGCT TCGGCGAAAT CGTTAAAGAC
AACGTCGATG GCAAACAAGT GACGCGCGTT TTTAGCCCCG GTTTACACTT TAAAGTCCCT
GTGATCGATA AGGTGAAGTT ACTTGATGCG CGTATCCAAA CCTTAGATGG TGCTGCAGAT
CGTTTCGTCA CCTCTGAGAA AAAAGACTTA ATGGTCGACT CCTATGTGAA GTGGCGTATT
TTTGATTTCG AAAAATACTA CCTCTCTACT AATGGGGGGA TTAAATCGAA TGCTGAGACC
TTACTACAAC GTAAGATCAA CAACGATTTA CGTACCGAGT TTGGTCGTCG TACGATCAAA
GAGATCGTTT CTGGGCAGCG TGATGAGTTA CAAAATAACG CGTTAGCGAA TGCTGCTGAG
AGTGCTAAAG ATTTAGGTAT TGAAGTTGTT GACGTGCGTG TTAAGCAGAT CAACTTACCT
GCAAACGTGA GTAACAGTAT TTACCAACGT ATGCGCGCGG AGCGTCAAGC TGTGGCTAAA
GAGCACCGTG CTCAAGGTAA AGAGCAATCT GAAATTATTC GCGCAACGAT TGATGCTAAT
GTCACTGTTA AAATTGCGGA AGCAGAGCGT AAAGCCTTAA CCATTCGTGG TGAAGGTGAT
GCATTAGCGG CAAAAATTTA TTCGGATGCT TATAACAAAG ATCCTGAGTT TTTCAGCTTT
ATGCGTAGCT TAGATGCTTA TCGTGCGAGC TTCTCTGGTA ATTCAGATAT CATGGTGTTA
GAACCTGATA GCGAATTTTT CAAATACATG AAGAGCAGCG CTGCGAAAAA ATAG
 
Protein sequence
MGRLSIVLIA VILGIGLSSV MVVNEGERAI VARFGEIVKD NVDGKQVTRV FSPGLHFKVP 
VIDKVKLLDA RIQTLDGAAD RFVTSEKKDL MVDSYVKWRI FDFEKYYLST NGGIKSNAET
LLQRKINNDL RTEFGRRTIK EIVSGQRDEL QNNALANAAE SAKDLGIEVV DVRVKQINLP
ANVSNSIYQR MRAERQAVAK EHRAQGKEQS EIIRATIDAN VTVKIAEAER KALTIRGEGD
ALAAKIYSDA YNKDPEFFSF MRSLDAYRAS FSGNSDIMVL EPDSEFFKYM KSSAAKK