Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0606 |
Symbol | hflC |
ID | 1168473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 632545 |
End bp | 633438 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637342598 |
Product | hflC protein |
Protein accession | NP_716239 |
Protein GI | 24372197 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAGAT TAAGTATTGT TCTGATCGCC GTTATATTAG GCATTGGTTT GTCATCTGTG ATGGTGGTTA ACGAAGGCGA ACGTGCGATT GTGGCGCGCT TCGGCGAAAT CGTTAAAGAC AACGTCGATG GCAAACAAGT GACGCGCGTT TTTAGCCCCG GTTTACACTT TAAAGTCCCT GTGATCGATA AGGTGAAGTT ACTTGATGCG CGTATCCAAA CCTTAGATGG TGCTGCAGAT CGTTTCGTCA CCTCTGAGAA AAAAGACTTA ATGGTCGACT CCTATGTGAA GTGGCGTATT TTTGATTTCG AAAAATACTA CCTCTCTACT AATGGGGGGA TTAAATCGAA TGCTGAGACC TTACTACAAC GTAAGATCAA CAACGATTTA CGTACCGAGT TTGGTCGTCG TACGATCAAA GAGATCGTTT CTGGGCAGCG TGATGAGTTA CAAAATAACG CGTTAGCGAA TGCTGCTGAG AGTGCTAAAG ATTTAGGTAT TGAAGTTGTT GACGTGCGTG TTAAGCAGAT CAACTTACCT GCAAACGTGA GTAACAGTAT TTACCAACGT ATGCGCGCGG AGCGTCAAGC TGTGGCTAAA GAGCACCGTG CTCAAGGTAA AGAGCAATCT GAAATTATTC GCGCAACGAT TGATGCTAAT GTCACTGTTA AAATTGCGGA AGCAGAGCGT AAAGCCTTAA CCATTCGTGG TGAAGGTGAT GCATTAGCGG CAAAAATTTA TTCGGATGCT TATAACAAAG ATCCTGAGTT TTTCAGCTTT ATGCGTAGCT TAGATGCTTA TCGTGCGAGC TTCTCTGGTA ATTCAGATAT CATGGTGTTA GAACCTGATA GCGAATTTTT CAAATACATG AAGAGCAGCG CTGCGAAAAA ATAG
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Protein sequence | MGRLSIVLIA VILGIGLSSV MVVNEGERAI VARFGEIVKD NVDGKQVTRV FSPGLHFKVP VIDKVKLLDA RIQTLDGAAD RFVTSEKKDL MVDSYVKWRI FDFEKYYLST NGGIKSNAET LLQRKINNDL RTEFGRRTIK EIVSGQRDEL QNNALANAAE SAKDLGIEVV DVRVKQINLP ANVSNSIYQR MRAERQAVAK EHRAQGKEQS EIIRATIDAN VTVKIAEAER KALTIRGEGD ALAAKIYSDA YNKDPEFFSF MRSLDAYRAS FSGNSDIMVL EPDSEFFKYM KSSAAKK
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