Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0603 |
Symbol | hfq |
ID | 1168470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 629756 |
End bp | 630028 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637342595 |
Product | host factor-I protein |
Protein accession | NP_716236 |
Protein GI | 24372194 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGG GGCAATCTTT ACAAGACCCA TTTTTGAACG CACTACGCCG CGAGCGCGTT CCAGTATCAA TTTACTTGGT AAACGGCATT AAACTCCAAG GACAGGTAGA GTCGTTTGAT CAATTTGTCA TTCTGTTGAA AAACACAGTG AGCCAAATGG TTTACAAACA CGCTATTTCT ACTGTTGTTC CTGCTCGCCC ATTTAACGTT GCTGGTCACC AAAATGCCCA GGGCGGTTAC GGTGCGCAAG ACGATATGCC AAGTGGCGAA TAA
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Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS TVVPARPFNV AGHQNAQGGY GAQDDMPSGE
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