Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0592 |
Symbol | orn |
ID | 1168461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 619424 |
End bp | 619969 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637342582 |
Product | oligoribonuclease |
Protein accession | NP_716225 |
Protein GI | 24372183 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCAG ACGCAAATAA TCTCATTTGG ATCGATCTTG AAATGACTGG GTTAGAACCC GATGTGGATA GAGTCATTGA AATTGCTACC TTAGTAACGG ACCAAGAACT CAATATTATC GGTCAGGGAC CTGTGATTGC GATTCACCAA TCGGATGAAG TATTAGCGGC TATGGATGAT TGGAACCAAA AACACCATGG TGAATCGGGA CTGATTGAGA GAGTCCGCGC CAGCCAAGTG AACGAAGCAG AGGCTGTTGC TCAAACTATT GCTTTCTTAG CGCAATACGT ACCTAAGGGC GTCTCACCAA TGTGCGGTAA CAGCGTGGGC CAAGACCGTC GCTTTTTAAA CCGCTACATG CGCGAGCTGG AGGATTACTT CCATTACCGC AACCTCGACG TAAGCACGGT TAAAGAGTTA GTGAAGCGTT GGAGCCCTGA AACCATGGCG GGTTTCAAAA AGCAAAACAC TCACCAAGCT TTGCAAGATA TCCAAGAGTC GATAGCAGAA TTGCAGTATT ACCGTAGCAA AGTATTTAAA ATTTGA
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Protein sequence | MAADANNLIW IDLEMTGLEP DVDRVIEIAT LVTDQELNII GQGPVIAIHQ SDEVLAAMDD WNQKHHGESG LIERVRASQV NEAEAVAQTI AFLAQYVPKG VSPMCGNSVG QDRRFLNRYM RELEDYFHYR NLDVSTVKEL VKRWSPETMA GFKKQNTHQA LQDIQESIAE LQYYRSKVFK I
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