| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0575 |
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| Symbol | hepA |
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| ID | 1168443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 594280 |
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| End bp | 597186 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342566 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | NP_716210 |
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| Protein GI | 24372168 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTTG CCTTAGGACA ACGTTGGATA AGTGATACCG AGTCAGAGCT TGGTTTAGGA
ACAGTCGTAC AAGTTGAAGG CCGTATGGTC ACAGTGTTAT TCCCGGCGAC TGGTGAGAAC
CGTATGTTCT CTCGCAACGA AGCCCCGCTG ACTCGCGTCA TATACAACCC AGGCGATACG
GTTGAAAGCC ACGAAGGCTG GAGCCTCTCG GTAGAAGAAC TCACCGAAAA AGACGACCTA
GTCGTCTACC ACGGCATCCA CAGCGAGACA GGCGAAAAAG TCAGCCTGCG CGAGACCCTG
TTAAACCACA ATATTCGTTT TAACAAACCG CAAGATCGCC TGTTCGCTGG GCAAATTGAC
CGCCTAGACC GCTTTGGTAT TCGTTATCAA TGCCAGTTAC TGCGTCATCA ACTGGCCACC
TCGGATTTAC TGGGTTTACA AGGACCACGC GTTGGCCTTA TTCCCCATCA AATGTGGATC
GCCCATGAAG TGGGTCGCCG TTATGCGCCG CGGGTGTTGC TAGCCGACGA AGTGGGTTTA
GGTAAAACCA TCGAAGCGGG TCTGATTATC CACCAACAAC TGCTGACATG CCGTGCCGAG
CGGGTATTGA TTATTGTGCC GGATACCCTG CGCCATCAGT GGTTAGTAGA GATGCTGCGC
CGCTTTAACC TGCGCTTCTC CGTGTTTGAT GAAGACCGTT GCGTTGAAGC CTTTGCTGAC
CACGACAACC CTTTCTATAC CGAACAGTTA GTGATTTGTT CACTCGAATT ACTGCGTAAA
AAGAAACGCC TCGACCAAGC GCTTGATGCC GATTGGGATC TGTTAGTAGT TGATGAAGCG
CACCATTTAG AGTGGACCGA AGAAGCCCCA AGCCGCGCCT ACCAAGTAGT GGAAGCCTTA
AGCGAAGTCG TACCGGGCGT ATTATTACTG ACCGCAACAC CGGATCAACT CGGTCACGAG
AGTCATTTTG CGCGCTTGCG CCTGCTCGAC CCGGATCGTT TCTATGACTA CGACGCCTTC
CTTGCCGAAG AAAATAGCTA CAAAGACGTC GCCATTGCCG CCGAAGCTTT AGCGGGCGAA
AGCAAATTAT CCGATTATGC TATCAACAGC TTAACCGAAT TACTCAGTGA AAAAGACATA
GCACCGAGCA TTCGGTTAAT TCAAGCCGAA GGGATCGACA GTGAGTTGCA ACAAGCGGCG
CGCAGCGAAT TGCTGCAAGA GCTGCTCGAT CGCCACGGCA CTGGCCGCGT GCTTTACCGT
AACAGCCGCG CCTCGGTAAA AGGTTTTCCG AAACGTATTT TCAATGCCTA TCCCCACGCC
ATGCCAGAGC AATACCTCAC GGCGGCCCGT GTAAACGACA TGATGGGCGG CCGTAAAAGC
TTAGAAGCGA AAGCGGCACA AGCCTTAAGC CCTGAAAAGC TCTATCAAGA ATTTGAAGAT
AACAGCGCCA GTTGGTGGAA ATTCGACCCC CGCGTGGATT GGTTAATCGA ATTCTTAAAA
TCGCACCGCA GCAAAAAAGT GCTGATCATC GCCAGTGGCG CCGATACCGC CTTGAGCTTA
GAAGAAGCCC TGCGCACCCG CGAAGGCATT CAAGCGACCG TATTCCACGA AGGCATGTCG
ATTATCGAGC GCGATAAAGC AGGCGCTTAC TTTGCTCAAG AAGAAGGCGG CGCTCAGGCA
TTAATCTGTT CTGAAATCGG CTCCGAAGGT CGCAACTTCC AATTCGCTAG CCACTTAGTG
CTGTTCGATC TGCCATTAAA CCCAGATTTA TTAGAGCAAC GTATCGGCCG TTTAGACCGT
ATTGGGCAGA AGAACGATAT CCAAATTCAC TTGCCTTATC TTCAAGATAC CGCGCAGGAA
CGTTTACTCC AATGGTATCA CCAAGGTCTA AATGCCTTTG AGCTGACCTG CCCTGGCGGC
CATATACTTT TCAGTGAATT TGCCGAAGAA TTGTTAAATG TCCTTGTGGG CGGTGATGAA
GATGAGCTAA CCAATCTGCT CAATCACACC CAAAGCCGCT ATAAAGAACT GAAACACGCC
ATGGAACAAG GCCGCGATAA ACTGCTAGAA ATCAACTCCC ATGGCGGCGA TAAAGCCAAA
GCAATTGTCG AGCGTTTGGC CCAAAGCGAT CAGGACACTA AGCTGATTGG TTCAGTGATC
CGTTTGTGGG ACATTATCGG TGTTGATCAA GAAGATAAAG GTGAAAACTC TATCATTCTG
CGCCCAAGCG AACATATGAT GTTCCCGACT TATCCTGGCC TGCATGAGGA TGGCGTGACC
GTAACTTTTG ACCGTGATAC CGCACTCTCC CGTGATGATA TCGCCCTGAT CACCCAAGAG
CATCCTCTGG TGCAAACCGG GCTCGATTTG ATCACAGGCT CAGATACTGG TACCACAAGT
GTTGCGATAT TAAAAAACAA GGCATTACCT GCGGGCACCC TGTTTTTAGA ACTGATTTAT
ATGGCGGATG CCTCTGCGCC TAAATCGAGC CAGTTATATC GCTATCTACC GCCTACGCCT
ATCCGCATTC TGCTGGATAA AAATGGCAAC GACCTCTCAG CTAAAGTCGA TTACACCAGC
TTTGACAAAC AGTTAAGCGC AGTAAACCGC CATATTGGTA GCAAGTTAGT CACCGCATCA
CAGCCAATTC TGCATCCGTT ATTTGCTAAA GGCGAAGAGT ATGCCCAAGT GGCCGTCAAT
GAGTTAGTGG CTCAAGCGCG CGAGAAAATG ACCAGCCAGC TTACAGGCGA ACTCGAACGT
TTAGAGTCTC TCAAGGCGGT CAACCCCAAT ATTCGTGAGG AAGAGTTAGA ATACCTGCGT
AACCAAATGC AAGAGCTAAC CACTTACCTC GATGCGAGTC AGTTGCAGCT TGATGCGATT
CGTATGGTGC TGGTGAGCCA TGTGTAA
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| Protein sequence | MPFALGQRWI SDTESELGLG TVVQVEGRMV TVLFPATGEN RMFSRNEAPL TRVIYNPGDT
VESHEGWSLS VEELTEKDDL VVYHGIHSET GEKVSLRETL LNHNIRFNKP QDRLFAGQID
RLDRFGIRYQ CQLLRHQLAT SDLLGLQGPR VGLIPHQMWI AHEVGRRYAP RVLLADEVGL
GKTIEAGLII HQQLLTCRAE RVLIIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAFAD
HDNPFYTEQL VICSLELLRK KKRLDQALDA DWDLLVVDEA HHLEWTEEAP SRAYQVVEAL
SEVVPGVLLL TATPDQLGHE SHFARLRLLD PDRFYDYDAF LAEENSYKDV AIAAEALAGE
SKLSDYAINS LTELLSEKDI APSIRLIQAE GIDSELQQAA RSELLQELLD RHGTGRVLYR
NSRASVKGFP KRIFNAYPHA MPEQYLTAAR VNDMMGGRKS LEAKAAQALS PEKLYQEFED
NSASWWKFDP RVDWLIEFLK SHRSKKVLII ASGADTALSL EEALRTREGI QATVFHEGMS
IIERDKAGAY FAQEEGGAQA LICSEIGSEG RNFQFASHLV LFDLPLNPDL LEQRIGRLDR
IGQKNDIQIH LPYLQDTAQE RLLQWYHQGL NAFELTCPGG HILFSEFAEE LLNVLVGGDE
DELTNLLNHT QSRYKELKHA MEQGRDKLLE INSHGGDKAK AIVERLAQSD QDTKLIGSVI
RLWDIIGVDQ EDKGENSIIL RPSEHMMFPT YPGLHEDGVT VTFDRDTALS RDDIALITQE
HPLVQTGLDL ITGSDTGTTS VAILKNKALP AGTLFLELIY MADASAPKSS QLYRYLPPTP
IRILLDKNGN DLSAKVDYTS FDKQLSAVNR HIGSKLVTAS QPILHPLFAK GEEYAQVAVN
ELVAQAREKM TSQLTGELER LESLKAVNPN IREEELEYLR NQMQELTTYL DASQLQLDAI
RMVLVSHV
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