Gene SO_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0479 
Symbol 
ID1168351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp502638 
End bp504767 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content45% 
IMG OID637342475 
Productcytochrome c, putative 
Protein accessionNP_716115 
Protein GI24372073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGC GATGGAAAAC CAAAACAGCC TTAGGCGTGC TGTTTTGCTT AGGTTCTGCC 
GTAAGCGCTA CCACAATCGC ATCCGATGCT AAATCGGATG GTAAAGTGGT CCCTGGTGTG
GGTAATAAAC AACAAACTCA CTATACTCAA GATATTCTGG CTAATCCAAA GGTGTCAGAA
AATTTAATGG AAAAATCTCG TGGTGTTAAA ACACTGCAGG ATTATATTGT TCAAGAGCAA
GAATTGTTTG ATTTTCTTTT TGAAAATCAC CCAGTTTTTA AATATGACGC AGAAGGTCGA
TTAAAGGGCA CTTATAAAGT CAGTGACCGT GGTGAAGAAT ATCTACACGG TGGTGACAGT
GTTGCTTACA GTAAACACAG TAAAGAAGTT AACTCAACTG ACGGCACGGC AGTTCGCTAC
AGCGCCTATG AAGATGGTCA ACGCCCAAAG GCACTGCAAT ATCGTTTAGG GGCAAAATCG
ATTTTAGATT TTCCTAACAA GTTTGTTGGC CCAGAAAAAT GCGGTGAGTG TCATGGTCCG
CAATACGAAA AATGGAGACG TTCACGTCAC TCTAAGACGA TTCGCTTCCC TGGCGAACAT
CCAGAGGTCG ATAACGACCT GAAAAAACCA ATGTATACCA CTAAAGATAC CTCGATTCTG
CCATCGGGTA TTACTCCAGA CGCTATCTAT GCCACTGTGG GTACACCACG TACCAAATAC
GGTTTTATCG ATGCTTATCT GGTGCGCGGT ACTTACCACG TGAAAGATGG TCTGTTAAAG
GATGGCACTG GTACTATGGT CGCCGGTGGT AACCAGTTCT CCCGTGGTTG GGCTGAGTGG
TTAACGCCTG AAATGGCTGC AAAAATTAAC AAAGCCATCC CAAGTTTCCC TCTCAAAATG
GAAGATTTTG GTACTAGCGG TTCACACCAA TGGGGCATGA GCTCGTACGG TGCTAAGTAC
GAGAAAGAAT TCCTATTTCA ACCTGCTAGC TCCTATTGTG AAATGTGCCA CAGCTTCAAG
TTTGACTTCC AAACTAAAGA GGAGTTTTTT GCTGCTCTAG GGAACCCGAA AGAGCTGCAA
AAACACACTA TTTCTAAAGG TATTACCTGT GAAGAGTGTC ACGGCGCGGG TGGTCACTTA
GACGGTGGTA TCGGTGGCGG CATGCCATCT AACTGTGAAC GTTGTCACCA ACGCTTCAAC
TTTGTTGAAG AGTTAGCTGA GACACCACAG GGTCAAGAAA AGCTGGAATA CGCTTTCAAC
GTGAAGATGA AGTCTTCTTG CCCATCTTGC GGTACTGAAG GTTCGCAAAT GTTTGCTTCT
GCTCACTACG ACAAAGGTAT GCGTTGCTCA ACCTGTCACG ATCCACACGA AGTGACTGAT
GGTGATTGGA AATCTGGTAT CACTAAGCCA AAAATCATCA AAGAGTGTAC TGACTGTCAC
ACGGCTCAAG CTGAGATTGC TAAGAACACC AACACTCACA GCAACCAAAC CTGTCAAAGC
TGTCACATGC CAAACATGGG AAGCTGTGAA AACTTCACTG CGATCCAATT CCCTGATATG
GCGGGCTTCG ACAACGTTCG TAAGTCACAC ATGTGGAAGA TTGATGTCGA TCCACTGCGT
AAGACCCTTA ACCCACCTGA AGGTAAGTCT CGCGATGCGA CCACCAAAGG TTGGACTGTG
GCTAAAGACG AAAACGGTTA CAACTACCTC GACCTGATGT GGACTTGTGC CCGTACTTCG
GCTTCTGACC ACGACGTAAC TGAAAACAAA GGTTGTCATA GCCAGTTCCA ATCTGAACTC
GAAGTGGGCT TACATTTCGA AGACCAAATG GAAATTTATG GTGAAGTTCA GAAGTGGCAA
AAACCAGTGA AAGATCTGTT TGGCCAAGTT CTGCAAGGTT TACAACGTAT CGACAAGTTA
CTGGAAGTGA CCCAGTTACC TGTAGATAAG AAAACCGAAG TACTGATGCT GACTGATAAA
GCGCAAGACG TCATTAAGTT GGTGGAAGCA GACGGTTCAT GGGGTGCCCA TGGCCCACGT
TACACTCAAA AACGTTTAGA TGCTGCGCTT ACATATGTAC AGCAAGCTCA AGCCATCATC
GATGGTAATG GCTACAACGC TAAAATGTAG
 
Protein sequence
MMKRWKTKTA LGVLFCLGSA VSATTIASDA KSDGKVVPGV GNKQQTHYTQ DILANPKVSE 
NLMEKSRGVK TLQDYIVQEQ ELFDFLFENH PVFKYDAEGR LKGTYKVSDR GEEYLHGGDS
VAYSKHSKEV NSTDGTAVRY SAYEDGQRPK ALQYRLGAKS ILDFPNKFVG PEKCGECHGP
QYEKWRRSRH SKTIRFPGEH PEVDNDLKKP MYTTKDTSIL PSGITPDAIY ATVGTPRTKY
GFIDAYLVRG TYHVKDGLLK DGTGTMVAGG NQFSRGWAEW LTPEMAAKIN KAIPSFPLKM
EDFGTSGSHQ WGMSSYGAKY EKEFLFQPAS SYCEMCHSFK FDFQTKEEFF AALGNPKELQ
KHTISKGITC EECHGAGGHL DGGIGGGMPS NCERCHQRFN FVEELAETPQ GQEKLEYAFN
VKMKSSCPSC GTEGSQMFAS AHYDKGMRCS TCHDPHEVTD GDWKSGITKP KIIKECTDCH
TAQAEIAKNT NTHSNQTCQS CHMPNMGSCE NFTAIQFPDM AGFDNVRKSH MWKIDVDPLR
KTLNPPEGKS RDATTKGWTV AKDENGYNYL DLMWTCARTS ASDHDVTENK GCHSQFQSEL
EVGLHFEDQM EIYGEVQKWQ KPVKDLFGQV LQGLQRIDKL LEVTQLPVDK KTEVLMLTDK
AQDVIKLVEA DGSWGAHGPR YTQKRLDAAL TYVQQAQAII DGNGYNAKM