Gene SO_0479 details

Gene Information

• Locus tag: SO_0479
• ID: 1168351
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 502638
• End bp: 504767
• Gene Length: 2130 bp
• Protein Length: 709 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637342475
• Product: cytochrome c, putative
• Protein accession: NP_716115
• Protein GI: 24372073

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAGC GATGGAAAAC CAAAACAGCC TTAGGCGTGC TGTTTTGCTT AGGTTCTGCC 
GTAAGCGCTA CCACAATCGC ATCCGATGCT AAATCGGATG GTAAAGTGGT CCCTGGTGTG 
GGTAATAAAC AACAAACTCA CTATACTCAA GATATTCTGG CTAATCCAAA GGTGTCAGAA 
AATTTAATGG AAAAATCTCG TGGTGTTAAA ACACTGCAGG ATTATATTGT TCAAGAGCAA 
GAATTGTTTG ATTTTCTTTT TGAAAATCAC CCAGTTTTTA AATATGACGC AGAAGGTCGA 
TTAAAGGGCA CTTATAAAGT CAGTGACCGT GGTGAAGAAT ATCTACACGG TGGTGACAGT 
GTTGCTTACA GTAAACACAG TAAAGAAGTT AACTCAACTG ACGGCACGGC AGTTCGCTAC 
AGCGCCTATG AAGATGGTCA ACGCCCAAAG GCACTGCAAT ATCGTTTAGG GGCAAAATCG 
ATTTTAGATT TTCCTAACAA GTTTGTTGGC CCAGAAAAAT GCGGTGAGTG TCATGGTCCG 
CAATACGAAA AATGGAGACG TTCACGTCAC TCTAAGACGA TTCGCTTCCC TGGCGAACAT 
CCAGAGGTCG ATAACGACCT GAAAAAACCA ATGTATACCA CTAAAGATAC CTCGATTCTG 
CCATCGGGTA TTACTCCAGA CGCTATCTAT GCCACTGTGG GTACACCACG TACCAAATAC 
GGTTTTATCG ATGCTTATCT GGTGCGCGGT ACTTACCACG TGAAAGATGG TCTGTTAAAG 
GATGGCACTG GTACTATGGT CGCCGGTGGT AACCAGTTCT CCCGTGGTTG GGCTGAGTGG 
TTAACGCCTG AAATGGCTGC AAAAATTAAC AAAGCCATCC CAAGTTTCCC TCTCAAAATG 
GAAGATTTTG GTACTAGCGG TTCACACCAA TGGGGCATGA GCTCGTACGG TGCTAAGTAC 
GAGAAAGAAT TCCTATTTCA ACCTGCTAGC TCCTATTGTG AAATGTGCCA CAGCTTCAAG 
TTTGACTTCC AAACTAAAGA GGAGTTTTTT GCTGCTCTAG GGAACCCGAA AGAGCTGCAA 
AAACACACTA TTTCTAAAGG TATTACCTGT GAAGAGTGTC ACGGCGCGGG TGGTCACTTA 
GACGGTGGTA TCGGTGGCGG CATGCCATCT AACTGTGAAC GTTGTCACCA ACGCTTCAAC 
TTTGTTGAAG AGTTAGCTGA GACACCACAG GGTCAAGAAA AGCTGGAATA CGCTTTCAAC 
GTGAAGATGA AGTCTTCTTG CCCATCTTGC GGTACTGAAG GTTCGCAAAT GTTTGCTTCT 
GCTCACTACG ACAAAGGTAT GCGTTGCTCA ACCTGTCACG ATCCACACGA AGTGACTGAT 
GGTGATTGGA AATCTGGTAT CACTAAGCCA AAAATCATCA AAGAGTGTAC TGACTGTCAC 
ACGGCTCAAG CTGAGATTGC TAAGAACACC AACACTCACA GCAACCAAAC CTGTCAAAGC 
TGTCACATGC CAAACATGGG AAGCTGTGAA AACTTCACTG CGATCCAATT CCCTGATATG 
GCGGGCTTCG ACAACGTTCG TAAGTCACAC ATGTGGAAGA TTGATGTCGA TCCACTGCGT 
AAGACCCTTA ACCCACCTGA AGGTAAGTCT CGCGATGCGA CCACCAAAGG TTGGACTGTG 
GCTAAAGACG AAAACGGTTA CAACTACCTC GACCTGATGT GGACTTGTGC CCGTACTTCG 
GCTTCTGACC ACGACGTAAC TGAAAACAAA GGTTGTCATA GCCAGTTCCA ATCTGAACTC 
GAAGTGGGCT TACATTTCGA AGACCAAATG GAAATTTATG GTGAAGTTCA GAAGTGGCAA 
AAACCAGTGA AAGATCTGTT TGGCCAAGTT CTGCAAGGTT TACAACGTAT CGACAAGTTA 
CTGGAAGTGA CCCAGTTACC TGTAGATAAG AAAACCGAAG TACTGATGCT GACTGATAAA 
GCGCAAGACG TCATTAAGTT GGTGGAAGCA GACGGTTCAT GGGGTGCCCA TGGCCCACGT 
TACACTCAAA AACGTTTAGA TGCTGCGCTT ACATATGTAC AGCAAGCTCA AGCCATCATC 
GATGGTAATG GCTACAACGC TAAAATGTAG 

 

Protein sequence

MMKRWKTKTA LGVLFCLGSA VSATTIASDA KSDGKVVPGV GNKQQTHYTQ DILANPKVSE 
NLMEKSRGVK TLQDYIVQEQ ELFDFLFENH PVFKYDAEGR LKGTYKVSDR GEEYLHGGDS 
VAYSKHSKEV NSTDGTAVRY SAYEDGQRPK ALQYRLGAKS ILDFPNKFVG PEKCGECHGP 
QYEKWRRSRH SKTIRFPGEH PEVDNDLKKP MYTTKDTSIL PSGITPDAIY ATVGTPRTKY 
GFIDAYLVRG TYHVKDGLLK DGTGTMVAGG NQFSRGWAEW LTPEMAAKIN KAIPSFPLKM 
EDFGTSGSHQ WGMSSYGAKY EKEFLFQPAS SYCEMCHSFK FDFQTKEEFF AALGNPKELQ 
KHTISKGITC EECHGAGGHL DGGIGGGMPS NCERCHQRFN FVEELAETPQ GQEKLEYAFN 
VKMKSSCPSC GTEGSQMFAS AHYDKGMRCS TCHDPHEVTD GDWKSGITKP KIIKECTDCH 
TAQAEIAKNT NTHSNQTCQS CHMPNMGSCE NFTAIQFPDM AGFDNVRKSH MWKIDVDPLR 
KTLNPPEGKS RDATTKGWTV AKDENGYNYL DLMWTCARTS ASDHDVTENK GCHSQFQSEL 
EVGLHFEDQM EIYGEVQKWQ KPVKDLFGQV LQGLQRIDKL LEVTQLPVDK KTEVLMLTDK 
AQDVIKLVEA DGSWGAHGPR YTQKRLDAAL TYVQQAQAII DGNGYNAKM