Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0468 |
Symbol | ubiA |
ID | 1168341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 493080 |
End bp | 493940 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637342465 |
Product | 4-hydroxybenzoate octaprenyltransferase |
Protein accession | NP_716105 |
Protein GI | 24372063 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTAG GGCTAAGCGG CTGTATTACC TTTCCAACGG CTGAATCTAG CCATGTTAAA GTCATTTGGA ATAATCCTGC AGCGCTAAAT AACTGTGTCC ATAAGGGAAC AATTTTTGGC TCGGAAGGGC ATTTTTATGA CTATTGGCTC CACAGCGACC AAGATATGGT GTGGGGCACA TTGAATGAAA TGCGCATCAA AGCGCATAAA CTGAATGCAG ACACTGTTTA TCTATATGAA AATTTTGGAT TTTTAAGTTC AGTCACGTTA ATGGGTAATG CCTACGATTG CTCACAGGTT CCGCTGATAG ACAAGCCAGC GTCTGAGCCA GATGCAGCAA CCAATTCTAG CGAAATAAGC GAAGCGCCAA AGCAATAA
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Protein sequence | MNLKHKWDVY SRLTRLDRPI GTLLLLWPCL MALVLAAGGM PDLKVLIIFI IGVVIMRACG CIINDYADRD LDSHVERTKS RPLASGEIST KEALLLFVIL GLAAFGLVLL LNGLVVKLSV VGIILTIIYP FTKRVTNMPQ MFLGVVWSWS IPMAYAAQTG EVPIEAWWLF AANWFWTVAY DTMYAMVDRD DDLKIGIKST AILFGKYDRQ IIGLFQIAAL FCFVAAGWSA DRGLVYGLGL LTFVGFSTYQ QMLIFGRERA PCFKAFLNNN WAGLVLFVSL GADYLF
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