Gene SO_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0421 
SymbolampD 
ID1168299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp435462 
End bp436007 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID637342423 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionNP_716058 
Protein GI24372016 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTG AGTTTGGTTG GTTTACTGCG GCGCGGCGTT GTGAGTCGCC ACATTTTAAC 
CAGCGCCCCT TTGGGGAGAT TAGCCTGTTG GTGATCCACA ATATCAGCCT GCCCGCGGGA
TGCTTTGGCT TGCCTTACAT TGATCAATTA TTTCAAGGCT GTTTAGATAC CAACGCGGAT
AACAGTTTTG CTGATTTGGC TGGGCTTAAA GTATCAGCGC ATTTTTTAAT TCGCCGTGAT
GGTGAATGTG TGCAGTATGT GAGTTGTGAC GATAGAGCTT GGCATGCTGG CGTATCTCGT
TATGGCGAAA GGGAAAATTG TAATGACTTT TCCATTGGCA TTGAGCTTGA AGGAACCGAT
ACTGAGCCCT ATACTGCCGC CCAATATCAA CAACTTGTTG AATTGACTCA AGCCTTGTTA
GCACAATACT CTAGCTTGAG TGCTGAGCGG ATTGTTGGAC ATTGTGATAT TGCGCCAGTG
CGAAAGACTG ACCCTGGCCC AAGCTTTGAC TGGGAAAGGT ATTTAACAAA GCTTCGCGAC
TTCTAG
 
Protein sequence
MSFEFGWFTA ARRCESPHFN QRPFGEISLL VIHNISLPAG CFGLPYIDQL FQGCLDTNAD 
NSFADLAGLK VSAHFLIRRD GECVQYVSCD DRAWHAGVSR YGERENCNDF SIGIELEGTD
TEPYTAAQYQ QLVELTQALL AQYSSLSAER IVGHCDIAPV RKTDPGPSFD WERYLTKLRD
F