| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0383 |
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| Symbol | hsdM-1 |
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| ID | 1168260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 397292 |
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| End bp | 399049 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637342385 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | NP_716021 |
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| Protein GI | 24371979 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCAT CGGAGTTCAA AGACTACATC TTCGGCATGA TGTTCCTTAA GCGTCTATCA
GATTCATTTG ATGAAGCCCG TGAGCAGGTG TTCGAATACT ATCTTGCCAA AGGTAAAACC
CAAGTCGAGG CCGAAGCACT TGCCAGTGAT GAAGATGAGT ACGACAGCAC CTTCTATATT
CCTGAAGTTG CCCGCTGGTC AGCCCTTAAA GACTTAAAGC ACAACATAGG TGAAGCGCTC
AATACCGCCG CTGAAGCCAT TGAAGAGCAC AATCCAAACC TTGAGGGCGT GTTAGTCTCT
ATTGACTTCA ATATTAAAAA CAAGCTCTCC GATAATAAGC TGCGCGACCT GCTCAGCCAC
TTTAACAAGT ACCGCCTGCG CAATAGTGAT TTCGAACGCC CCGATTTACT CGGCACAGCC
TATGAATATT TGATTAAAAT GTTTGCCGAT AGTGCGGGTA AAAAAGGCGG TGAGTTCTAT
ACCCCGAGCG AAGTGGTGCA ATTGCTGGTG GCATTGCTCA AACCCCATGC AGGCATGCGA
ATTTACGACC CCACCGCAGG CTCGGGCGGT ATGCTGATCC AAATGCGTAA TTATCTTGCG
ACCCATAACG AGAATGCCGC TAACCTGTCT TTATACGGTC AAGAGATGAA CCTCAATACA
TGGGCAATCT GTAAGATGAA CATGTTTTTG CACGGGGTAC AAAGTGCCGA CATTCGCAAG
GGCGATACCC TACGCGAACC TAAGCATACT ATTGATGGCA GCCTAATGAC GTTTGATCGC
GTTATTGCCA ATCCGCCGTT TTCGTTATCG AAATGGGGCA AAGAAGACTG CGATAAAGAT
AAATATGGCC GCTTCCCCTA TGGCACACCA CCAAAAGACT CAGGCGACCT CGCCTTTGTG
CAGCACATGA TCGCCAGCAC CAATGATGAT GGCATGGTCG GCGTAGTCAT GCCCCATGGC
GTGCTGTTTC GAGGCTCCAG CGAAAAAGAC ATTCGTAAAG GCATACTCGA AGACGACTTA
TTAGAAGCCG TGATCAGCCT ACCATCAGGC CTATTCTATG GCACAGGCAT CCCCGCCTGT
TTGTTGATTA TCAACAAACA AAAGCCGAGC GAGCGCCAAG GCAAAGTACT GTTTATTTAT
GCCGAACTCG AATATCACGA AGGTAAAAAC CAAAACAGTT TACGTCCGCA AGATATCAAT
AAAATCGTCA CAACCTTCGA CAGCTTTAGC GAAATTAAAC GCTACTCAGC CGTAGTCAAA
CTAAAAGATA TCCGCGATAA CGACTACAAC CTCAATATCC GCCGCTATGC CGATACCTCG
CCACCCGCAG AAATATTTGA TGTGCGCGCC ATTCTTCACG GCGGCATTCC AGTGCGTGAA
GTAGAAAACG ATTATATTCA GGAAGAAATT CTTAAGGGTT TTGATGTCAG CTGTGTATTT
GAGCCTAAGC TCAACCATGC AAGCCAGAGC ACAGACCAAC AGTATTACCA GTTCAAAGCC
GAAATCACCA CCAAAGAGCA GATCCGCCCG CTTGTAGAAA ACAGTGTTGA GCAAGTTAAG
GCCATTGAAG ACTGTGCTAC TGATAACTCA GCAGAGCAAA CATCTACAAC GGAGCTTGCG
TCAGTAACAC TCATCGTTGG CCAGTTCGAA CGCTGGTGGG ACAAGTATCA AGTGTCACTG
CACCAACTCG ATGCCGAAAT GGCAGAAGCA GAACAGGTGA TGCAAGGTTA CTTGAAGGAG
CTGGGTTATG AGTCATAG
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| Protein sequence | MDASEFKDYI FGMMFLKRLS DSFDEAREQV FEYYLAKGKT QVEAEALASD EDEYDSTFYI
PEVARWSALK DLKHNIGEAL NTAAEAIEEH NPNLEGVLVS IDFNIKNKLS DNKLRDLLSH
FNKYRLRNSD FERPDLLGTA YEYLIKMFAD SAGKKGGEFY TPSEVVQLLV ALLKPHAGMR
IYDPTAGSGG MLIQMRNYLA THNENAANLS LYGQEMNLNT WAICKMNMFL HGVQSADIRK
GDTLREPKHT IDGSLMTFDR VIANPPFSLS KWGKEDCDKD KYGRFPYGTP PKDSGDLAFV
QHMIASTNDD GMVGVVMPHG VLFRGSSEKD IRKGILEDDL LEAVISLPSG LFYGTGIPAC
LLIINKQKPS ERQGKVLFIY AELEYHEGKN QNSLRPQDIN KIVTTFDSFS EIKRYSAVVK
LKDIRDNDYN LNIRRYADTS PPAEIFDVRA ILHGGIPVRE VENDYIQEEI LKGFDVSCVF
EPKLNHASQS TDQQYYQFKA EITTKEQIRP LVENSVEQVK AIEDCATDNS AEQTSTTELA
SVTLIVGQFE RWWDKYQVSL HQLDAEMAEA EQVMQGYLKE LGYES
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