Gene SO_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0369 
Symbol 
ID1168246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp382765 
End bp383652 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content48% 
IMG OID637342373 
ProductLysR family transcriptional regulator 
Protein accessionNP_716009 
Protein GI24371967 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACATT TTTCAGCTCT GCCCATTTTT GTCACTGTGG TCGAATGCGG TAGCTTTTCA 
TTGGCAGGAC AAAAGCTTGG ACTCAGTAAA TCGGCGATTA GTAAACGTAT CAGTCAGTTA
GAGCAGCACT TAGGGATTCA ACTATTACAA CGCACCACCC GCAGCTTGAG CCTAACCGAC
GCTGGCGCGC GCTATTTCGA GTACATTCGC CCAGCGGTGC AGCTCACCCA AGAAGGATTA
GATGCCATCT CCGAATTGCA GCAAACACCT AGAGGCAATT TGCGGATTTC AGTACCTATG
GTGTTTGGCC GCTTGTATAT TGCACCTTTA ATAGCCGAGT TTTTAAAACG TTACCCCGAT
ATCCAGCTGC AAATGCAGAT GGATGACAAG ATCACAGATT TAATCGCAGG CGGCTTTGAT
TTAGCCATTC GTATCGGCGA ACTGCCCGAC TCCAGCCTTA TCGCTCGCAA AATTGCCCCT
TGTTTGAGCG TGATTTGCGC GTCCCCCGCG TATCTAACTC AGCACGGTTT ACCCATGACG
CCCTGCGAGT TAACTCAGCA TAACTGCTTG TTTTACAGTT ACTTTCAAGA TGGTGTGGAA
TGGAGTTTCC ACAGTCCCGA TGGCATGCAA CGTGTTCAGC CCAAAGGCAA CTATCAGGTC
AATAATAGTG ATGCAATCAA TCAGGCCTGT CTCGATGGTC TCGGCATCGC CAACCTACCA
CGTTTTATTG TTGAGCCGGA TCTGCAAACC GGACATTTAC AGGCGTTACT TACAGACTAT
CCGCTACCCG AACATGGCAT TTACGCCGTG TATCCACAGC GAAAATACCA ACCGACCAAA
GTGACGGTAT TGATTGAGTT TTTGATGGCG AAGTTAGGAC AATACTAG
 
Protein sequence
MEHFSALPIF VTVVECGSFS LAGQKLGLSK SAISKRISQL EQHLGIQLLQ RTTRSLSLTD 
AGARYFEYIR PAVQLTQEGL DAISELQQTP RGNLRISVPM VFGRLYIAPL IAEFLKRYPD
IQLQMQMDDK ITDLIAGGFD LAIRIGELPD SSLIARKIAP CLSVICASPA YLTQHGLPMT
PCELTQHNCL FYSYFQDGVE WSFHSPDGMQ RVQPKGNYQV NNSDAINQAC LDGLGIANLP
RFIVEPDLQT GHLQALLTDY PLPEHGIYAV YPQRKYQPTK VTVLIEFLMA KLGQY