| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0359 |
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| Symbol | spoT |
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| ID | 1168236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 368255 |
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| End bp | 370360 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637342363 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | NP_715999 |
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| Protein GI | 24371957 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATCTGT TTGAAGGTCT AAAGGAGTCT GCTTCCGGTT ACTTAGAACC TGAACAGGTA
GAATTGCTCA AGCAGGCTTA CCAAGTTGCG CGTGATGCCC ATGAAGGGCA AATGCGCACT
AGCGGCGAAC CTTATATTAC CCATCCGGTT GCGGTCGCCC GCATCCTCGC CGAAATGCGT
CTCGACCATG AGACGCTGAT GGCGGCATTG CTGCACGATA CCATCGAAGA TACCTATGTC
ACCAAAGAAG ATTTAGCCGA GCGGTTTGGC GAATCGGTGG CTGAATTGGT TGAAGGGGTG
TCTAAGCTCG ACAAGCTGAA ATTTCGCGAT AAGAAAGAAG CTCAAGCAGA AAACTTTCGC
AAAATGATGA TGGCAATGAC GCAGGATATC CGCGTTATTC TCATCAAGCT TGCCGACCGC
ACCCACAATA TGCGCACCTT AGGCGCACTT CGTCCTGACA AACGCCGTCG TATTGCCCGT
GAAACCCTAG AGATTTATGC GCCGATAGCC AACCGACTTG GTATTCACAA TATCAAGACT
GAGCTAGAGG ATTTAGGCTT TCAAGCCTAT TATCCCATGC GCTATCGAGT GCTGAAAGAA
GTGGTGAAAG CCGCCCGCGG CAACCGTAAA GAACTCATTC AAGGTATTGA GGCTGCGGTG
TTAACCCGCC TAAACGATGC GGGCATTAAA GGCAAAGTCA AAGGCCGCGA AAAAAACCTC
TACTCCATCT ACAACAAGAT GCAGAGTAAA GAGCTGCAAT TTCAAGAAGT CATGGACATC
TACGCCTTCC GGGTGATTGT CGACTCCATC GATACCTGTT ACCGCGTGCT CGGTGCCATG
CATGGCCTGT ATAAACCGCG TCCTGGTCGC TTTAAAGACT ATATTGCTAT CCCAAAAGCC
AACGGTTACC AGTCGCTACA TACTTCCCTG TTCGGCCCAC ATGGTGTGCC CGTCGAGATC
CAAATACGTA CCGAAGATAT GGATCAAATG GCCGACAAAG GGGTTGCGGC ACATTGGGCC
TACAAAGGCG GCGCCGAAAC CGGCCAAGGT ACAACAACCC AAGTCCGCGC CCGCAAATGG
ATGCAAAGCT TGCTGGAACT GCAACAGAGC GCCAGCACCT CCTTCGAATT CGTGGAAAAC
GTTAAAACCG AACTCTTCCC CGAAGAGATT TATGTGTTTA CTCCCGAAGG CCGTATTTTA
GAATTACCGG TTAACGCCAC CGCCGTCGAC TTTGCCTATG AAGTCCACAC CGATGTGGGT
AACACCTGCG TTGGTGCCCG CGTGAACCGC CAAGCTTATC CGTTAAGCCA GCCATTAATC
TCCGGCCAAA CCGTTGAGAT CATTACCGCC AAAGGCGCGC GCCCGAACGC TGCTTGGCTG
AACTTTGTGG TAACAGGTAA GGCCCGCGCT AAAATCCGCC AAGTACTGAA AAGCCTTAAG
GGTGATGACG CGATTGCACT CGGTCGCCGC CTGCTCAACC ATGCACTCGG CAAGACTAAG
CTCGATAGTA TTCCAGCGGA ACAGATTGAA AAAGTCGTGC GCGATACTAA GCACGCTAGT
TTAAACGCCT TACTCGCCGA TATCGGCCTT GGCAATGCCA TGAGCATTGT GATCGCCCAA
CGTTTGATTG GCGATAATCT TGAGAATCAA GAAAGCCGCG ATTCCCACCA GATGCCAATC
CGTGGCGCCG AAGGTATGTT AGTCACCTTC GCCAATTGCT GCCGCCCCAT TCCGGGTGAT
GCGGTGATTG CCCACGTGAG CCAAGGCAAA GGCTTGGTGG TGCACATGGA AAACTGCGCT
AACATTCGCG GCTATCAGAG CGAGCCAGAT AAATATATTC CCGTCCAGTG GGACAATGTC
GAAGGTGTTG AATATCAAGC GAATCTGCGG GTGGAAATTG TTAACCACCA AGGCGCATTG
GCCAAAATCA CCTCGATTAT CGCCGCCGAA GGCTCGAACA TTCACAACCT CAGCACCGAA
GAGCGCGATG GTCGGGTTTA TCTGATTAAC CTGCGGATTT CGGTGAAAGA CAGGATCCAT
TTAGCTAACG TGATGCGCCG TATCCGGGTA CTGCCCGAAG TGCTCCGCAC ATCCCGTAAT
CGTTAA
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| Protein sequence | MYLFEGLKES ASGYLEPEQV ELLKQAYQVA RDAHEGQMRT SGEPYITHPV AVARILAEMR
LDHETLMAAL LHDTIEDTYV TKEDLAERFG ESVAELVEGV SKLDKLKFRD KKEAQAENFR
KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKT
ELEDLGFQAY YPMRYRVLKE VVKAARGNRK ELIQGIEAAV LTRLNDAGIK GKVKGREKNL
YSIYNKMQSK ELQFQEVMDI YAFRVIVDSI DTCYRVLGAM HGLYKPRPGR FKDYIAIPKA
NGYQSLHTSL FGPHGVPVEI QIRTEDMDQM ADKGVAAHWA YKGGAETGQG TTTQVRARKW
MQSLLELQQS ASTSFEFVEN VKTELFPEEI YVFTPEGRIL ELPVNATAVD FAYEVHTDVG
NTCVGARVNR QAYPLSQPLI SGQTVEIITA KGARPNAAWL NFVVTGKARA KIRQVLKSLK
GDDAIALGRR LLNHALGKTK LDSIPAEQIE KVVRDTKHAS LNALLADIGL GNAMSIVIAQ
RLIGDNLENQ ESRDSHQMPI RGAEGMLVTF ANCCRPIPGD AVIAHVSQGK GLVVHMENCA
NIRGYQSEPD KYIPVQWDNV EGVEYQANLR VEIVNHQGAL AKITSIIAAE GSNIHNLSTE
ERDGRVYLIN LRISVKDRIH LANVMRRIRV LPEVLRTSRN R
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