| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0313 |
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| Symbol | potE |
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| ID | 1168193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 318823 |
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| End bp | 320142 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342320 |
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| Product | putrescine transporter |
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| Protein accession | NP_715953 |
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| Protein GI | 24371911 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAT CAGAAAATAA AATTGGCGTT GTCCAATTAA CGATTATCAC CATAGTGAAT
ATGATGGGCT CTGGGATTAT CATGCTGCCC ACCCAATTAG CACAAGTCGG TACTATCTCT
GTGCTTTCTT GGCTTGTTAC CGCTGCAGGC TCAACCGCGC TGGCCTTTGC ATTTGCAAAA
TGCGGTATGT TCAGCAAAAA ATCCGGTGGG ATGGGCGGTT ATGCCGAATA TGCCTTTGGC
CGCAGCGGTA ACTTTATGGC GAACTACACC TATGCGGTTT CGCTACTTAT CGCCAACGTC
GCCATCGCCA TCTCCGCTGT AGGTTACGCA GCCGTATTAC TCGAAGTTAA CTTAAGCCCT
ATGGCCATCT GTCTTGCCAC TATTGGCGTC CTTTGGTTAG CCACAGTCGC AAACTTTGGC
GGTGCTCGCA TTACTGGCCG CGTGAGTAGC GTGACCGTGT GGGGGATTAT TCTGCCAGTG
ATTGGCGTGT CATTGATCGG TTGGTTCTGG TTTGATATTG ACCTCTATAA AGGTGCTTGG
AACCCACATG ATATGCCTTT CTTCAAAGCC TTAGGTGGTT CAATCGCGAT GACCTTATGG
GCATTTCTTG GCTTAGAATC TGCCTGCGCC AACTCAGAGG CTGTTGATAA TCCAGAGAAA
AATGTTCCTA TCGCCGTAAT GGGCGGAACC TTAGGTGCAG CACTTATCTA TATTGTTTCC
ACTAACGTGA TTGCCGGTAT TGTACCCAAC GCTGAACTTG CCAGCTCAAA TGCTCCTTTT
GGTTTAGCTT TCGCGCAAAT GTTTAACCCA GTTGTGGGTA AAATCGTGAT GGCCTGCGCC
ATTATCTCCT GTACTGGTTC GCTGCTCGGT TGGCAGTTTA CTATTGCGCA AGTGTTTAAA
GCCTCTGCCG ATGAAGGTTT CTTCCCTAAA GTGTTCGCTA AAGTCAGCAA AGCCGATGCA
CCAATTTGGG GGATGACCAT TATTGTTTCG ATTCAAACCC TGCTGTCTTT GATGACTATC
AGCCCATCAC TGAGCAAACA GTTTGAAGCG CTCGTTAACC TTGCGGTGGT AACTAACATT
GTGCCTTATA TCCTGTCGAT GGCAGCCCTA GGCGTAATGC AAAAACAACT GAAAGTGCCC
GCAAACAAAG CCCGTGTCGC CAACGTGATT GCGGTTATCG GTGCCCTTTA TAGCTTCTAC
GCCCTCTATA GTTCTGGTGA AACAGCTGTG ATGTTAGGCG CTATCGCGAC CTTCTTCGGC
TGGACTATCT ACGGGGTGAT CTCAAATAAA ACCCCAAGCG TCGAGATTAA AGCGGCGTGA
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| Protein sequence | MSKSENKIGV VQLTIITIVN MMGSGIIMLP TQLAQVGTIS VLSWLVTAAG STALAFAFAK
CGMFSKKSGG MGGYAEYAFG RSGNFMANYT YAVSLLIANV AIAISAVGYA AVLLEVNLSP
MAICLATIGV LWLATVANFG GARITGRVSS VTVWGIILPV IGVSLIGWFW FDIDLYKGAW
NPHDMPFFKA LGGSIAMTLW AFLGLESACA NSEAVDNPEK NVPIAVMGGT LGAALIYIVS
TNVIAGIVPN AELASSNAPF GLAFAQMFNP VVGKIVMACA IISCTGSLLG WQFTIAQVFK
ASADEGFFPK VFAKVSKADA PIWGMTIIVS IQTLLSLMTI SPSLSKQFEA LVNLAVVTNI
VPYILSMAAL GVMQKQLKVP ANKARVANVI AVIGALYSFY ALYSSGETAV MLGAIATFFG
WTIYGVISNK TPSVEIKAA
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