| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0294 |
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| Symbol | trpS |
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| ID | 1168176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 300003 |
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| End bp | 301001 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637342303 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | NP_715934 |
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| Protein GI | 24371892 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAAAC CCATAGTACT CAGCGGTGCA CAGCCGTCCG GCGAATTAAC CATAGGTAAC
TACATGGGTG CATTGCGTCA ATGGGTTGCC ATGCAAGATA GCCACGATTG CCTATATTGT
GTGGTGGACT TGCACGCCAT TACCGTGCGC CAAGACCCTC AAGCATTGCG TGAGGCCTGC
TTAGATACGC TTGCACTGTA TTTAGCCTGC GGCGTCGACC CGAAAAAGAG CACGGTATTT
ATCCAATCTC AAGTGCCGCA GCACACCCAG CTGGGTTGGG CATTAAATTG CTATACCCAA
ATGGGTGAGC TGAGCCGTAT GACGCAGTTT AAGGATAAGT CACAAAAGCA CGCCAACAAT
ATTAACGTGG GTCTGTTTGG TTATCCGGTA TTGATGGCGG CGGATATTCT GCTGTATCAA
GCGAATGAAA TCCCTGTTGG TCAAGATCAG AAGCAACATC TTGAATTAAC GCGTGATATC
GCCACTCGCT TTAACAACGC GTACGGCGAG ACGTTTACCA TCCCTGAGCC TTTTATCCCT
GAGCATGGCG CGAAGGTTAT GTCGCTACAG GATCCGCTGA AGAAGATGTC AAAGTCAGAC
GATAACCGTA ACAACGTGAT TGGTCTGCTT GAAGATCCAA AAGCGGTAAT GAAAAAGCTC
AAAAAAGCCA TGACCGACAG TGACGAGCCA CCAGTGGTGC GTTTCGATAT AGAGAATAAG
CCTGGTGTAT CTAACCTGCT GAGCTTAATG TCAGGTATCA CAGGCCAAAG CATTGCCAGC
CTCGAAGCTG AGTTTGAAGG TAAGATGTAC GGCCACTTAA AAGGGGCTGC GGGTGAAGCG
GTAGTTGGCA TGTTAGAGCC GCTGCAGGAG CGTTACCGTG CGCTGCGTGC CGACCGTGCT
TACCTCGACC AAGTGATGAG AGCGGGCGCT GAAAATGCTC AAGCTCGTGC TGAAGTCACC
TTGAAAAAGG TATACGAGAA GATTGGTTTA TTGGTGTAA
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| Protein sequence | MTKPIVLSGA QPSGELTIGN YMGALRQWVA MQDSHDCLYC VVDLHAITVR QDPQALREAC
LDTLALYLAC GVDPKKSTVF IQSQVPQHTQ LGWALNCYTQ MGELSRMTQF KDKSQKHANN
INVGLFGYPV LMAADILLYQ ANEIPVGQDQ KQHLELTRDI ATRFNNAYGE TFTIPEPFIP
EHGAKVMSLQ DPLKKMSKSD DNRNNVIGLL EDPKAVMKKL KKAMTDSDEP PVVRFDIENK
PGVSNLLSLM SGITGQSIAS LEAEFEGKMY GHLKGAAGEA VVGMLEPLQE RYRALRADRA
YLDQVMRAGA ENAQARAEVT LKKVYEKIGL LV
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