Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0249 |
Symbol | rpmD |
ID | 1168132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 254105 |
End bp | 254287 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637342256 |
Product | 50S ribosomal protein L30 |
Protein accession | NP_715889 |
Protein GI | 24371847 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTA AAACTGTAAA AGTTACTCAA ACTAAAAGTG GTATCGGTCG TTTACCAAAG CACCGTGCTA CCCTAACGGG TCTTGGTTTG CGTCGCATTG GTCACACTGT TGAATTAGAA GATACTCCTT CTGTTCGCGG TATGATCAAC AAGGTCTACT ACATGGTTAA GGTGGAGGAT TAA
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Protein sequence | MATKTVKVTQ TKSGIGRLPK HRATLTGLGL RRIGHTVELE DTPSVRGMIN KVYYMVKVED
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