Gene SO_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0231 
SymbolrplC 
ID1168114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp245912 
End bp246550 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content47% 
IMG OID637342238 
Product50S ribosomal protein L3 
Protein accessionNP_715871 
Protein GI24371829 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCG GTCTTATTGG TCGTAAAGTT GGTATGACTC GCATCTTCAC TGAAGATGGT 
GTTTCTATAC CTGTTACAGT AATTGAAGTT GCTGGCAACC GTGTTACTCA AGTGAAAACT
TTAGAAACTG ACGGTTACCG CGCACTTCAA GTTACTACTG GTACCAAAAA AGCCAATCGC
ATCACTAAAC CAGAAGCAGG TCACTTTGCT AAGAGCGGCG TTGAAGCCGG TCGTGGACTG
TGGGAATTGC GTCTGGCAGA CGGTGAAGGC GAAGGCATTG AAGTTGGTGC TGAGCTAAAC
GTAGGTATCT TCGCTGATGT AGCGAAAGTT GACGTTACTG GTCAATCTAA AGGTAAAGGT
TTCCAAGGCG GTGTTAAGCG CTGGAACTTC CGTACTCAAG ATATGACACA CGGTAACTCT
TTGTCGCACC GTTCGAACGG TTCTATCGGT CAGAACCAAA CGCCTGGTCG CGTATTTAAA
GGCAAGAAAA TGTCAGGCCA CATGGGTGCC GAGCGTGTTA CTACTCAAAA TCTAGACGTT
GTACGTGTAG ATGTTGAACG TAACCTGCTA CTGGTTAAAG GTGCTGTTCC GGGCGCAACT
AATGGCGACC TGATCATCAA GCCTGCAGTT AAAGCTTAA
 
Protein sequence
MAIGLIGRKV GMTRIFTEDG VSIPVTVIEV AGNRVTQVKT LETDGYRALQ VTTGTKKANR 
ITKPEAGHFA KSGVEAGRGL WELRLADGEG EGIEVGAELN VGIFADVAKV DVTGQSKGKG
FQGGVKRWNF RTQDMTHGNS LSHRSNGSIG QNQTPGRVFK GKKMSGHMGA ERVTTQNLDV
VRVDVERNLL LVKGAVPGAT NGDLIIKPAV KA