Gene SO_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0208 
Symbol 
ID1168093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp215641 
End bp216105 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content41% 
IMG OID637342208 
ProductRNA-binding protein 
Protein accessionNP_715849 
Protein GI24371807 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGT CATTTCTTAT TGTTTTAGTT ATTGCCATTC TTGGCGCAAT TGCGCTATCT 
CAATTTGCAA CAACATTACC TGCTTACATC GCCTTTGTTG CTGGCGTAAT TATTACCACG
CTTATTTTTA AATTAGTGCC TGATTCAGGC AAAGCTCAAG CAGATGATGA GCAATATGTC
GGCCCAACAA TGACACTTTA TGTGGGTAAT TTGCCCTATC GTGTTCATGA GGGAGAAGTA
AAAGTCTTAT TTGGTGAATT CGGCCCAGTC AATTCAGTCC GTTTAGTGCG TGATCGTAAA
ACAGGCCGTC GTAAAGGATT TGGTTTTGTT GAAATGTCTG AAGCTGGTGC TCAAAAAGCA
ATGGTTAAAC TGAATGACTT TAACTTCCAA GAAAGAACGT TAAAGGTAAG GGAAGCTAAA
ACACAGGATT CAGAGGCAGC GGATCGAACA GGCACCGATG AATAA
 
Protein sequence
MQKSFLIVLV IAILGAIALS QFATTLPAYI AFVAGVIITT LIFKLVPDSG KAQADDEQYV 
GPTMTLYVGN LPYRVHEGEV KVLFGEFGPV NSVRLVRDRK TGRRKGFGFV EMSEAGAQKA
MVKLNDFNFQ ERTLKVREAK TQDSEAADRT GTDE