Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0197 |
Symbol | |
ID | 1168083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 207241 |
End bp | 208347 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637342199 |
Product | fatty acid desaturase family proteiin |
Protein accession | NP_715839 |
Protein GI | 24371797 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1398] Fatty-acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC CCCCTATCAT CTGGCTTAAT GTCATCCTAT TTAGCTTGAC CTTCCTCAGT GCGGTCATCC TCGTTCCTTG GTATGGAATT GTCTACGGTT ATGGTGCAAG TGAATGGATT GCTTTTGTGG TCTTAGCCTT TGCCAGTGGC CTGTCGATCA CCGCAGGTTA CCATAGACTC TGGTCACATA AAGCCTATAA GACACACCCT GCAATACGTT TCCTTTACGC TCTTGGTGGC GCGTTAGCAT TACAAAACAG TGCGTTACAT TGGGCGTCGG ATCATCGTGT GCACCATAAA CATGTTGATG ATAATGATAA AGACCCTTAC TCTGCCAAAA TGGGCTTCTG GTACAGCCAT ATCGGTTGGA TGCTACGCGA GTATCAAGCT CAGCGTTACC ATGACTATCA AAACGTGCGT GATTTGCAGA ACGATCGTAT CGTGATGTGG CAACATAAGC ACTATCTTAC ACTTGTGCTC CTTATGAACA TTGGTCTACC GGCACTGCTA GGTTGGTTTA CAGGGAATAT CGCAGGCATG TTGTTGATGG CGGGGCTCCT GCGCTTAGTG GTCGTGCATC ACTGTACCTT CTTTATCAAC TCCCTCGCTC ACGTGTGGGG CTGCCAACCC TATACCGATA AAAATACTGC CCGCGACAAC GGTTTTCTGG CTGTACTGAC CTACGGTGAG GGTTACCATA ATTTCCACCA TATCTTCGAA AACGATTACC GTAACGGCAT CAAGTGGTGG CATTACGATC CCACTAAGTG GCTGATAAAG TCTTTATCTT GGGTCGGTTT AGCCAAAGAT TTACGTACTA GCCCGCAGGA GCGGATAGAG AGTGCCCGCT TACAGATGCA GCTATTACAT GCCAAAAACA AAGTGCTCAA TTTGCCAAAT GCCGATGAAA TAATTGAAAA AATTCAACAA GAGTATGAGT TGATGAAACA ACACTTACTC GAATATTACC AAGCCCAAAA GACACTGTTA GAGGCCAAAC GTAAGCAACT GGTCGATCAG CAATTATTAC AGCAAGTCGA AGAGTTGAAA ACCCGATTTC TGAACCAACA AAAAAGCTGG AAGAGCCTGA CAGCAACTTA TAGCTAG
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Protein sequence | MKKPPIIWLN VILFSLTFLS AVILVPWYGI VYGYGASEWI AFVVLAFASG LSITAGYHRL WSHKAYKTHP AIRFLYALGG ALALQNSALH WASDHRVHHK HVDDNDKDPY SAKMGFWYSH IGWMLREYQA QRYHDYQNVR DLQNDRIVMW QHKHYLTLVL LMNIGLPALL GWFTGNIAGM LLMAGLLRLV VVHHCTFFIN SLAHVWGCQP YTDKNTARDN GFLAVLTYGE GYHNFHHIFE NDYRNGIKWW HYDPTKWLIK SLSWVGLAKD LRTSPQERIE SARLQMQLLH AKNKVLNLPN ADEIIEKIQQ EYELMKQHLL EYYQAQKTLL EAKRKQLVDQ QLLQQVEELK TRFLNQQKSW KSLTATYS
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