Gene SO_0189 details

Gene Information

• Locus tag: SO_0189
• ID: 1168075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 192488
• End bp: 200056
• Gene Length: 7569 bp
• Protein Length: 2522 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637342191
• Product: fibronectin type III domain-containing protein
• Protein accession: NP_715831
• Protein GI: 24371789

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAACA ATATATTTAC CAAGTGCAGT TTGCCGTTGT TGTTTTTGGC CTCACCGCTG 
CAGGCAGCAC CATCCATCTC GCTATCATCA AGTCGTATGG TTAATCGTTC ACCTAAGGTA 
GCAATAGAGC AGCAAAAAAC ACTGCAGCAG CTTGAAGGTG CTGGTGCATT TGCCTCCTTT 
AGCGCTCAGC CTCGCATCCA GCAAAAAGCA GAAGCGGCTC CAGAAGAAGT TAATGTATTG 
GCTTTTTTGG AACAAAATGG ATTGCTCCAA TCATCCGACG TTGTTGCCGC GACGAACAGT 
GGTAATCTGG ATAGTGAATT TAATAAAAGT CTCAGTGACG TTTTTTATTG TAATCCTGCT 
AATTATGAGT TCTCTGATTG CAAGATTGCA TCGATCAATC GGCAGACCCC TGCGACATCG 
CCGACCAACG CTGACACACT AACCTGGCGC TTTCTTTTTG ATCTTGCAGT GACAGGCGTG 
GATGCGGCGG ATTTTAACAT TGGCGGCACT ACAGCCACTA TTACTGGCAT CACCCAAAAC 
ACATCTACTG ATTACAGTAT TACGATATCC GGTGGTGACC TTGCCAGTTT TAATGGCACT 
GCCAGCATTA GCCTGAAGCC TGCAGGTCAG TATGATATTA GGCTTGTTTA CCCTGGGTTG 
ACCCCCCCGG ATGATCTAAT GGTTCCAGGC GTAAGAGGGA TTAATAACAA TTCTTATGTG 
GTGAGTAACA ATGTTGCACC CACAGATATC TCCCTAACCA GTACAAGTGT CAACCAAAGT 
GGCGGGATTA ACGCTGTAGT GGGAACATTA AGTAGCACCG ACGCTGATGT TGGTGACTCC 
CATACTTACA CTTTAGTATC CGGTGCAGGC GACACCAATA ACGCCAGTTT TAACATCAGT 
GGTTCTTCCC TGCGTGTAAA CAATGCTGCT TTGCTTACTG CGGGCACTTA CAACGTGCGC 
GTGCGAACAG CTGATAATGC CAGCGCGACT TACGAAGAAG CCTTCACAAT TACGGTGGTC 
GATAATGTGC CACCTGCCGT GACCTCAATT ACCCTGAGCG GCTCACCTGC AAATACCGCC 
ACCAGTGTCG ATTTTGTGGT TGCCTTCGAT ACCTCGGCCA ATAACATCTC GATTGATGAC 
TTCCAACTGA CCTCCACAGG TGGGGCGGCT GGCACAATCT CTGCTGTCTC GGCATCCTCT 
GGTACTAGCG TCAATGTGAC GGTTAACGGT ATTAGCGGTA ATGGCACGCT CCGTCTGGAT 
TTGAAATCGT CCACCAATAT CAGCGATAGC ATAGGTAACG CTGGCCCCGC TGCTTACACC 
AGCGGTTCTG TCCACAACGT CGCCATTCCC ACCGCGCCTA CGGTCCCAAC TATAGGGACG 
GCTACTGCTG GTGATGGTCA AGTTAGCGTT ACTTTCACTG CGCCCAGCAA TAACGGCGGC 
TCGGCGATCA CGACCTATAC CGCAACGGCT AATCCCGGTG TTGCATTTGG TACCTGTGCT 
GGGCCAGCGG CCTGTACTGC AACAGTAACA GGATTGGATA ACGGCACTGC TTATACTTTT 
ACCGTGACTG CAACGAACGG AGTAGGCACC AGCGTTGCTT CCGGCGCTTC TAACTCTGCC 
ATCCCTAAAG GCAATCAAAC CATTACCTTT ACCCAGCCTT CTGCACAAAA CTTTGGTACT 
ACGCCAACCC TTACAGCCAC AGCAGACTCT GCAACAGGAA CTGATAATTT AACAGTCAGC 
TTCAGCTCAT CTACCACAGG AGTTTGTACC ATCAGTAGCG GCGGTAACCT GGCATTTGTG 
ACCGCCGGTA GCTGTACTAT CGATGCTGAC CAAGCGGGCG ACTCTGCTAC CAACCCTGCC 
CCGACGGTAT CCCGAACCTT TACTGTGAAT GCCGTCGTTC CTAGTGCCTC AACTGTTGGT 
ACTGCGACCG CAGGTGATAC TCAGGCTACT GTGACCTTTT CGGCACCAGT AAGCACTGGC 
GGCTCGCCGA TCCTTGCCGG AGGCTACACA GTCACCGCTA GCCCCAATGG TGCAACTGGT 
ACAGGATCAA GTTCGCCGAT TACTGTAACG GGGTTGACTA ACGGAGTGGC CTACACTTTT 
ACAGTCACAG CGACTAACTC CGCAGGGACT GGTGCTGCGT CTGCGGCTTC TAATTCAGTC 
ACACCCGCAT CGCCTCAGAC TATTACTTTT GCTAACCTTG GGGCGCAGAA TTTTGGAACG 
TCGCCCAACT TGTCTGCCAT CTCAACATCA GGCTTAACCG TCAGCTTTAG CTCATCTACC 
ACAGGGGTAT GTACGGTTAG CGGTTCAACT TTGACTTTTG TCACGGCAGG TACTTGTACC 
ATCAACGCTG AGCAGGCTGG TAATTCGTCC TATCTGGCCG CCGCCACGGT CAGCCGAACA 
TTTACAGTAA ATCCTGTTGT TCCGAGTGCG CCAACAATTG GCACAGCAAC TGCTGGTGAT 
ACTCAGGCCA GTGTTGCCTT TGTTGCCCCG GTTAACACGG GTGGAACCTC CCTAACAGGA 
TATACCGTGA GCGTCAGCCC GCCGGATGTT GCCCCAGTTA ATGGTGCCAG TTCGCCAATT 
TTAGTGACAG GCTTGACCAA TGGCCAAGCT TATACATTCA CCGTTACTGC CGATAACTCG 
GCGGGTACAG GCGCTGCGTC AGCTGCATCA AATAGCGTGA CGCCCGCAGC AAGCCAATCC 
ATTACATTCA GTAATCCTGG AGCGCAAAAC TTTGGTACCT CACCGACACT GGCCGCTACG 
TCCGATTCCG GTTTGATTCC GACCTTTACG TCATCGACTC CCAGTGTGTG TACTATTACG 
AGCGGTGGCG CCTTGGCCTT TGTCGCTGTG GGATCTTGCA CCATCAATGC TGATCAAGCT 
GGCAATGGGA GTTATTTGGC GGCGACTCAA GTTAGCCGTT CATTCAGTGT CAATGCGGTT 
GTCCCTGGTG CGCCAACAAT AGGCTCTGCC ACTGCGGGGA ATTCTCAAGC TACTGTCAGT 
TTTAGTGCTC CGACATTTAC TGGTGGTGCG GTAATTACGG GTTACACCTT AGTCTCTAGT 
CCTGGTGGTA TAACGGCATC GGGTGCATCT TCACCTATCA CTATAACTGG ATTAACCAAT 
GGGACTTCTT ATTCATTTAC TGTTGCCGCT ATAAATTCAG TCGGAACCGG TAGCGCCTCT 
GTGGCGAGTA ACGTAGTGAA GCCTAATGGC GCCCCGATTA TTACCTCAAC CGCGATAACC 
AGTGCTACCC AAGATGCGGC CTATAGCTAC ACCTTGGTGG CGAGCGACAG TGATGTGGGT 
GACAGTGTCA CCTTAAGCGC AGTCACACTG CCAAGTTGGC TGAGCTTCAA TGCGGGTACG 
GGCGTGCTGA GTGGAACACC AAGTAACGCT AGCGTGGGCA GTCATGCGGT GGTGCTGCGG 
GTCACGGATG TGGATGGCCT AACGGCAGAG CAAAGCTTTA CGATAGTGGT AGCGAACGTC 
AATGATGCAC CGACCATTAG CTCTACGGCC TTAACTAGCG CCACCCAAGA TGCGGCGTAT 
AGCTACACCT TAGTGGCGAG TGACAGTGAT GCGGGCGACA GTGTCACCTT AAGCGCCGTG 
ACCTTACCCA GCTGGCTGAA CTTCAATGCA GCCACTGGCG TGTTAAGTGG TACGCCAAGT 
AATGTCAATG TGAGTAGTCA CGCCGTGGTA CTACGTGCCA CCGATGTGGG TGGTTTGACG 
GCAGAGCAGA GCTTCAGCAT TGTGGTCGCA AACGTCAATG ATGCGCCGAC TATCACTTCA 
ACGGCACTGC CCAGCGCCAG CCAAGATTCG GCATATAGCT ACACCATGGT AGCGAGTGAC 
AGCGATGTGG GCGACAGTGT CACCTTAAGC GCAGTCACAC TCCCAAGCTG GCTGAACTTC 
AATGCGGCCA CTGGCGTGTT AAGTGGCACG CCAAACAATA CCAATGTTGG CAATCATGCC 
GTGGTACTGC GAGCAACCGA CGTTGACGGT CTCAGCGCAG AGCAAAGCTT TACGATAGTA 
GTGGCTAACG TTAATGATGC GCCGACTATT ACCTCAACAG CACTGACCAG TGCCAGCCAA 
GATGCGGCCT ATAGCTACAC CTTAGTGGTA ACCGACAGCG ATGTGGGCGA CAGTGTGATC 
TTAAGTGCCG TGACTTTACC CAGCTGGCTG AACTTCAATG CGGGTACGGG CGTACTCAGC 
GGAACACCAA GTAACGCTAA CGTGGGCAGT CATGCGGTGG TGCTACGCGC CACGGATGTG 
GATGGCCTAA CGGCAGAGCA AAGCTTTACG ATAGTCGTGG CGAACGTTAA TGATGCGCCA 
GTTGCAACCA ATCAGGTTGT GACGCTGGAA GAAGACAGTT CCGCCATGAT CACGCTTGTA 
GGCGAAGATG CAGATAATGA TCCTCTGACC TATGAGATCA CTGCTCAGCC TGTGTCTGGC 
ACCTTAGAGC AACACGGCAA TGTGTGGTTG TATACGCCAG AGAAGGACTT TAATGGCAGT 
GATTCTATCG GTTTTATTGC AAAAGATGCT GAGCAGAGTT CAGAGCCTGC GACTATCACT 
ATTACAGTGA TGCCTGTGAA TGACGATCCT CAGGCCGCCG ATGACAGCTA TACTTTAACC 
AGCGCGACGA ATGACACCTA TTTGCTGGCA GTATTGGCAA ACGATGTGGA TGTAGACGGT 
GACACCTTAA CCATTGATGG CGCTGTTGCG GATATTGGCA GTGTGCAAAT CACCTCGGAT 
GGGCTGAGTT TTACTGCGCC AAAGGCGTAT GTTGGACCTG TTGGCCTGCG TTATACCATT 
AGTGATGGTA ATAAAGGGCG AGCTACTGCC AAAGTGAATG TGCTGATTGA AGGCACTGAT 
TCCGAGAATC AACCAGTTAT TACTTTACCT GATGATGTTG AGGTGAATGC GACTGGGCTA 
TTTACACGGG TGAAACTCGG TTTTGCCAAG GCTGTTGATC GCAATGGTCA TCCTCTGCCG 
GTGTCATTGG TGAATAAGAG TTTATTCTTT GCCCCAGGTA GTTATCTCGC CTATTGGCAG 
GCAGTAGATC GAGACGGCAA CAAGGCTATT AAGGCGCAGA AAGTGAAGGT AAATCCTTTG 
ATTTCGCTGA GCAAAGATCA AGTGGTTGGC GAAGGTAATC AAGTCACTGT CAGCGTTCAT 
CTTAATGGAG AGGCGCCAAG CTATCCGCTG AGTATTCCTT ATACAGTGTC AGGAACGGCA 
GATAGTAGTG ATCATGATCT CGTTGATGGC GTGGTTGAGA TTACCTCGGG GCAAATGGCA 
GAAATCCACT TTAATACCCT TAACGATAGT GTCAGTGAAG GGAATGAAGA GGTGTTGATC 
AGCTTAGATC CAAGCCTCAA TCTTGGTAGT AAGCAACAGA CCCAAGTGAT GATTACCGAA 
GTCAATATTG CACCACTGGC CAGTTTAGCG GTCACTCAAG CAGGCCAGCA GCAGGTCATT 
GTCGCGCAAA ATGGTGGGGA TGTGCATATT CGTGCCACCG CCTCGGATGC CAATGAGCAA 
GATACATTAA CGCTGACGTG GGAAAGCGGT GCGTTAAGCT TGCAAGCGGA CGGAGCTGGC 
ATGTTCTTCT CGCCTGCAGC AGTACAAGCG GGGATTTATC CCGTTAGCCT AACGGTGACC 
GATGATGGTT CGCCCGTGAT GTCGAGTACC GCAACAGTCT ATATTGTGGT GCGTCCCAGC 
TTAGCGGCAT TGACGAATGA GGATACCGAC GGCGATTTAA TTCCCGATGC TCAAGAAGGT 
TACCGTGATA GTGATAGCGA TGGTATTCCT GATTATTTGG ATGCCAATAG CGATTGCAAT 
GTGATGCCAG AAGGCGAATT ACAGCCAGTG TACTTCTTGG CCGAAGGGCA GGCGGGCGTT 
TGCTTACGTC TGGGGAATAT TGCCCTAAGC CGTGGGCAGA GTGGCGTGCA GTTACAACCT 
GAAGCAGTTA CTGAAGATAA GGCTGCAGCT AATGTGGGCG GTATTTTCGA TTTCGTCGCC 
ACTGGCTTAC CGCAACCGGG ACAAAGCTAT AGCTTAGTAT TGCCACAGCG CGCGCCTATC 
CCTGCGAATG CAGTTTATCG CAAGTTGAGT GCGCAAGCGG GGTGGCGAGA TTTTGTGATT 
GATGCAAACA ATAGCGTTGC GAGTACCGAA GGTGAGCGTG GTTTCTGTCC TCCACCGGGT 
GATAGCAGTT GGACGGCAGG GTTAACCGAA GGCCATTGGT GCGTGCAGTT GACCATCGAA 
GACGGTGGCC CGAACGATGA TGATGGCGTA GCGAACCGTA CCATTGTCGA CCCGAGTGGG 
GTTGCCGTGA TGCTCAATGG TAATAGCTTG CCTGTTGCCA ATCCTGACTC GGCAACGATT 
GCGTGGAACC AGAGTATCGA TGTGAACGTG CTTGCTAACG ATACTGACAG CGATGGTGAT 
AGTTTAACTG TGACCCAAGT TATCAGTGAG TTCGGTACTG TCACTGCGCT AGCCAATCAG 
CAGCTCAGTT ACACACCAGC AGCGGATTTT ATTGGCACCG ATGTGTTGGT GTATAGCATT 
ACTGATGGTA AGGGCGGTAC GGCGAGTAGT GAACTGACGA TCGTGGTGAA TGGCAATACT 
GCGCCAGTAA CAGTAAATGA TAGCGCCGCT ACTGATGATC GCACCAGCTT GCTTATCGAT 
GTGCTGAGTA ATGATACGGA CGTTGACGGT AACCCATTAA CACTGTTAAG CGCGACGGCT 
CAACAAGGCG CGGTTGCTAT CGAATCGAAC AAACTGCGCT ATATCCCTAA AACTGGGTTT 
GATGGTGTGG ATACCGTGAC TTATCGCATC AGTGACGGTC TAGGTGGTGA AGCAACGGGG 
CAATTGCTCA TCACAGTGAA AGCATATCAA GAAGTGATTA TTGATAATAA ATCGGGGGGC 
GGCAGTATGG GCTTATGGGC TTTGGTATTC GTCTTGTCGT GCGCGCTCAT GCGCCGCCAA 
GCACTGCAAA GAGGGGCTGT TGGTTGTCTA CTATTAGTGA GCGTTACTCA ACAGGCGCAG 
GCGACAGACT GGTATATCGA GGGGTTTATC GGTCAAGCGA AAGCCGATAA AACGCGTCCC 
GATTTGAATG TTCAAGTTGG CGAGGGTGAG ATCCTCAAGC TTGTTGATAC GGGTAATGCC 
TTTGGGGTGA GTTTGGGATA CCAATGGACA CCGACAGTGG CTCTGGAGCT AGGCTATGCT 
GACTTTGGTG AAGGCTGCGC GAGGATAAAG GGCGCGACGT TAACGCCTGA GCAATACCAT 
GAGTTGGTGA AGGCGGTAAC CCCCGTGCTT GCCGATGGGG TGATGCTGGG GCTGAGATTC 
ACTCTACTGC AGCATGAGGG TTGGCGCTTT GAGGTGCCCG TTGGCTTGTT CCATTGGCAA 
GCTGATATCA GCAGTACCAT GGGAAACACC ACCATAACGA CGGATTTAGA TGGCACAGAT 
TGGTATACCG GGGTGCGCTT TAGTTACCAA TTTAGCGATG CGTGGTCGGT AGGCGTCGGC 
TATCAATACA TCGATATCGA ACCGAATGAT TTACTGAGCT ATCAGCTCAA TCTGCGATAT 
CGGTTTTAA 

 

Protein sequence

MFNNIFTKCS LPLLFLASPL QAAPSISLSS SRMVNRSPKV AIEQQKTLQQ LEGAGAFASF 
SAQPRIQQKA EAAPEEVNVL AFLEQNGLLQ SSDVVAATNS GNLDSEFNKS LSDVFYCNPA 
NYEFSDCKIA SINRQTPATS PTNADTLTWR FLFDLAVTGV DAADFNIGGT TATITGITQN 
TSTDYSITIS GGDLASFNGT ASISLKPAGQ YDIRLVYPGL TPPDDLMVPG VRGINNNSYV 
VSNNVAPTDI SLTSTSVNQS GGINAVVGTL SSTDADVGDS HTYTLVSGAG DTNNASFNIS 
GSSLRVNNAA LLTAGTYNVR VRTADNASAT YEEAFTITVV DNVPPAVTSI TLSGSPANTA 
TSVDFVVAFD TSANNISIDD FQLTSTGGAA GTISAVSASS GTSVNVTVNG ISGNGTLRLD 
LKSSTNISDS IGNAGPAAYT SGSVHNVAIP TAPTVPTIGT ATAGDGQVSV TFTAPSNNGG 
SAITTYTATA NPGVAFGTCA GPAACTATVT GLDNGTAYTF TVTATNGVGT SVASGASNSA 
IPKGNQTITF TQPSAQNFGT TPTLTATADS ATGTDNLTVS FSSSTTGVCT ISSGGNLAFV 
TAGSCTIDAD QAGDSATNPA PTVSRTFTVN AVVPSASTVG TATAGDTQAT VTFSAPVSTG 
GSPILAGGYT VTASPNGATG TGSSSPITVT GLTNGVAYTF TVTATNSAGT GAASAASNSV 
TPASPQTITF ANLGAQNFGT SPNLSAISTS GLTVSFSSST TGVCTVSGST LTFVTAGTCT 
INAEQAGNSS YLAAATVSRT FTVNPVVPSA PTIGTATAGD TQASVAFVAP VNTGGTSLTG 
YTVSVSPPDV APVNGASSPI LVTGLTNGQA YTFTVTADNS AGTGAASAAS NSVTPAASQS 
ITFSNPGAQN FGTSPTLAAT SDSGLIPTFT SSTPSVCTIT SGGALAFVAV GSCTINADQA 
GNGSYLAATQ VSRSFSVNAV VPGAPTIGSA TAGNSQATVS FSAPTFTGGA VITGYTLVSS 
PGGITASGAS SPITITGLTN GTSYSFTVAA INSVGTGSAS VASNVVKPNG APIITSTAIT 
SATQDAAYSY TLVASDSDVG DSVTLSAVTL PSWLSFNAGT GVLSGTPSNA SVGSHAVVLR 
VTDVDGLTAE QSFTIVVANV NDAPTISSTA LTSATQDAAY SYTLVASDSD AGDSVTLSAV 
TLPSWLNFNA ATGVLSGTPS NVNVSSHAVV LRATDVGGLT AEQSFSIVVA NVNDAPTITS 
TALPSASQDS AYSYTMVASD SDVGDSVTLS AVTLPSWLNF NAATGVLSGT PNNTNVGNHA 
VVLRATDVDG LSAEQSFTIV VANVNDAPTI TSTALTSASQ DAAYSYTLVV TDSDVGDSVI 
LSAVTLPSWL NFNAGTGVLS GTPSNANVGS HAVVLRATDV DGLTAEQSFT IVVANVNDAP 
VATNQVVTLE EDSSAMITLV GEDADNDPLT YEITAQPVSG TLEQHGNVWL YTPEKDFNGS 
DSIGFIAKDA EQSSEPATIT ITVMPVNDDP QAADDSYTLT SATNDTYLLA VLANDVDVDG 
DTLTIDGAVA DIGSVQITSD GLSFTAPKAY VGPVGLRYTI SDGNKGRATA KVNVLIEGTD 
SENQPVITLP DDVEVNATGL FTRVKLGFAK AVDRNGHPLP VSLVNKSLFF APGSYLAYWQ 
AVDRDGNKAI KAQKVKVNPL ISLSKDQVVG EGNQVTVSVH LNGEAPSYPL SIPYTVSGTA 
DSSDHDLVDG VVEITSGQMA EIHFNTLNDS VSEGNEEVLI SLDPSLNLGS KQQTQVMITE 
VNIAPLASLA VTQAGQQQVI VAQNGGDVHI RATASDANEQ DTLTLTWESG ALSLQADGAG 
MFFSPAAVQA GIYPVSLTVT DDGSPVMSST ATVYIVVRPS LAALTNEDTD GDLIPDAQEG 
YRDSDSDGIP DYLDANSDCN VMPEGELQPV YFLAEGQAGV CLRLGNIALS RGQSGVQLQP 
EAVTEDKAAA NVGGIFDFVA TGLPQPGQSY SLVLPQRAPI PANAVYRKLS AQAGWRDFVI 
DANNSVASTE GERGFCPPPG DSSWTAGLTE GHWCVQLTIE DGGPNDDDGV ANRTIVDPSG 
VAVMLNGNSL PVANPDSATI AWNQSIDVNV LANDTDSDGD SLTVTQVISE FGTVTALANQ 
QLSYTPAADF IGTDVLVYSI TDGKGGTASS ELTIVVNGNT APVTVNDSAA TDDRTSLLID 
VLSNDTDVDG NPLTLLSATA QQGAVAIESN KLRYIPKTGF DGVDTVTYRI SDGLGGEATG 
QLLITVKAYQ EVIIDNKSGG GSMGLWALVF VLSCALMRRQ ALQRGAVGCL LLVSVTQQAQ 
ATDWYIEGFI GQAKADKTRP DLNVQVGEGE ILKLVDTGNA FGVSLGYQWT PTVALELGYA 
DFGEGCARIK GATLTPEQYH ELVKAVTPVL ADGVMLGLRF TLLQHEGWRF EVPVGLFHWQ 
ADISSTMGNT TITTDLDGTD WYTGVRFSYQ FSDAWSVGVG YQYIDIEPND LLSYQLNLRY 
RF