Gene SO_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0175 
SymbolgspM 
ID1168062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp181623 
End bp182099 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content51% 
IMG OID637342178 
Productgeneral secretion pathway protein M 
Protein accessionNP_715817 
Protein GI24371775 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATT TGCGGGCTTG GTGGCAAGGG CTTGCGTCGC GCGAGCAGCA GATCGTAGGT 
TTTGGCGCCG TATTCTTAGT GATCGGTGTG TTTTACTGGG GCATCTGGAC ACCCATTGCC 
AATGCCGAAG CCAATGCGCT ACGCAACTTA ACGGCGCAGC AGCAAACCCT GACGTATGTA 
AAACAAACCG CGAACAAAAT TGCTGGCTTA AAACAAAGCG GTGCTAAACC GACAATGAGC 
GGCAGTTTAA GTTCGGTCGT CAACCAAACA GCGGGCAGTT ACGGCTTAGT GATCACTCGC 
ATGCAGCCCC AGGGCGATAA AATCCAAGTG TGGATGGATG ATGTGCCATT CGATGCCCTG 
CTCAATTATT TGAGTGACTT AGTGCAGAAA AAAGGCCTAT CACTTGAGAG TGTTGATTTG 
GCTGAGGCCG ACGCGCCAGG CTATGTCAAA GTGAGACGTA TCCAACTAGC GCAATAG
 
Protein sequence
MDNLRAWWQG LASREQQIVG FGAVFLVIGV FYWGIWTPIA NAEANALRNL TAQQQTLTYV 
KQTANKIAGL KQSGAKPTMS GSLSSVVNQT AGSYGLVITR MQPQGDKIQV WMDDVPFDAL 
LNYLSDLVQK KGLSLESVDL AEADAPGYVK VRRIQLAQ