Gene SO_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0164 
SymbolhslR 
ID1168051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp170700 
End bp171098 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content46% 
IMG OID637342167 
Productheat shock protein 15 
Protein accessionNP_715806 
Protein GI24371764 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA GTTCAGACGA CAGTGGCAGC GTTCGACTCG ATAAGTGGTT ATGGGCCGCA 
CGTTTTTATA AAACCCGTGC CATTGCCAAA GAAATGATCA ACGGCGGTAA AGTACATTAC
AACGGCGCTC GCACCAAATC CAGTAAGAAT GCAGAGATAG GTGCCATTCT TAAGATAAGG
CAGGGATATG ACGATAAAGA GATCGTCATA AAAAAATTAT CTGAAGTGCG CCAAAGTGCA
TCAATAGCGC AGGAATTGTA CCAAGAAACG GCCGCCAGTG CCGCTAAACG TGCGGTAAAC
GCCGAAGCCA GACGATTAAA CATACTGAAT AATCCTGCGC CCGACCGCAA ACCGGATAAA
AAACAGCGAC GAGAGCTTAT CCGTTTTAAA GAATTCTAA
 
Protein sequence
MTQSSDDSGS VRLDKWLWAA RFYKTRAIAK EMINGGKVHY NGARTKSSKN AEIGAILKIR 
QGYDDKEIVI KKLSEVRQSA SIAQELYQET AASAAKRAVN AEARRLNILN NPAPDRKPDK
KQRRELIRFK EF