| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0130 |
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| Symbol | |
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| ID | 1168025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 137207 |
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| End bp | 140014 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637342141 |
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| Product | protease, putative |
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| Protein accession | NP_715772 |
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| Protein GI | 24371730 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain
[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAGTA AAAAGAGTAT CACAGCGTTT GGATTGATGT TGGCCTTGCT AAGTGGCACC
AGTATCGCTG CACCTAATCA CACACCAGCG GATGCGGGGG TCATTAACAA AGAAAGGATC
CTCTATTGGC TAATTAAGCG TGGCGAAGTC TCCGAGGATG CGAGCGACAG TGTCAAGCAA
GCGGCCGTTG AAGCCTATAT TGCCCGCGCG AGCCTAGCAC AGCCTAAAGA GCCTCGAGTG
GTGATTGAGG CCGAGCAAGA ACGCCTCCAT AAAGCCAAAA CCACAGCAAT GATGCGCGCA
CCTGCGCAAC GTGCTTTAGC GGATGCCGAT GTGACTAAAA CGGTTAAGGT ATTAACCGTA
CTGATTGATT TTCCTGATTT AAGATATAAC AACAACGGCT TAACCGCGAG TGATACAGAC
ATGTATTATT CAAGTTATCC CGCCTCTCAC TACAAGAATT TACTCTTCTC AACGGCCGGT
TTTAGTGGCC CGCAGGGGCA AAGTTTAGAT TCGGCCTATC AGTATTACCA GGCTGTTTCG
GGCAAAACCT TCTTCTTTAC TGGCGATGTT AAAGGTTGGT ATACCGCTGG CCAACATGCT
GATTACTATG GTGCTAATGA TGCTGATACC AGCAACGACG TCAAAGTTGG CGAGCTGGTT
AAAGAGGCGG TATCACAGGC GGTTGCCAGT ATGTCAGCTG CGGAGCTTGC TAGCTATGAT
ATTGAAGATC CATATGATTT AAATGGTAAT GGTAACTTAA ATGAAGCTGA TGGCATTATT
GACCATGTGA TGATTTTCCA CTCCAGTATT GGGGAAGAAA CCGGTGGTGG CAAATTAGGG
GCTAATGCGA TTTGGTCGCA CCGTTATTAT GTAAATCAAA GCACTCAAGG TTATACCTTG
CCTGGAACAA ACAAAAAAGT CTTTGGTTAT ACGATTCAAC CAATAGATGC GGCGACTGGG
GTGTGTACCC ATGAATTTGG CCACGATCTC GGACTTCCCG ATGAATACGA TACTACGGAT
AACGCTAACA AAGATGGTTC GCCCGTTGGT TATTGGTCGT TGATGTCGGG CGGCAGTTGG
ACTGGAACTA TTTCTGGCGC ACAGCCAAGC GGTTTTAGCC CCTACGCGCG TTCGTATTTA
CAGACAAAAT ATAAAGGTAA ATGGCTTAAC GAGCGTGAGA TTAGCTTAGA TACCATTCCT
AGATCGGGCA TGGAAATCAC GCTCAATCAG GCGATAAACC AAGATGCGGT GAATCAAATA
TCGATTCCGC TACCTGCGAC ACAAATTGCC TTTAAAGCGC CTTATCAAGG GACTTACCAG
TACTATTCTG GCCAAGGAAA CATGCTGGCA AACAGCATGA GCTTTGCTAC AACCTTGCCA
GTGACGAGTG ATAAACTCAC GCTTTCCATG CAAGCGAGTT GGGATATTGA AAACAGCTTT
GACTATATGC AGGTCAATGT GGATGGCACA GCGATTGCGG GTAATTACAC TCAATCCAGC
AACACCATTA ATAGTGCTCG ACATATCATT ACGGGTAAAT CATCGAGCAT CCCGACCTCT
GTGGGAGACG ATGCTTGGGT CGCGTTGGAA TATGATTTGT CGGCCTATGC AGGCAAAGCT
GTCACTATTG AATTTAACTA TGTGACCGAT GAGGCAGTTA GTGGCTCAGG TATTACTATC
GACAATATCA GCATCAAACA AGGCACGAGT GAGTTGTATG CCGATAATGC CGAAGCGGCA
AACAAAGCCA CTTTCGCTGG TTATAGCCGC ATTACTAACA CTCGCCCAGG CCCTTCATCC
CGTTACCTTA TTCAATTACG CAGCCACAAT GGTGTCGATG CGGGGCTGAA GAGTAAAGGG
TTTGATCCTG GTGTGCTGCT ATGGCTCGAG AATGCCAGCT ATAGCGATAA CAACGTGTCA
GACCATCCCG GCCGAAGCTT AATTGGCGTG ATTGATGCTG ATCAAAATAT GATTGGCACT
AACTCTACCG ATGTACAAAT CCGAGATGCT GCTTTTAGCA CGGTAAAACA AACCGCTTAT
TTTGGTGACA ATAGTCTCGA TGCGATCAGT CTGTTTGACG ATAGTTTAGA TTACAGTGCG
CCGCTGCAAC CTCAGTCAGG TATGCAACTG CAACAACTTG GGTTGACGAT GGAAGTTGTC
GCTCAAGCCA GTGATAACAG CACCGCAGTG ATCCGTTTAG CGAATGCAAA CGCCGATCCC
GCATTAACTC CCTTAACCGC CGCAATTAAT CTGAGCCAAA ACGGGCAGGC GGTGACGGTT
TCTGCTGCGG TAGAAGGAGG AGAAGGCGCG TATTCCTACG CTTGGGATTT CGGTGTAGCG
GGAGCAACAA GTACCTCGGC CACAGCGGTT TATACCTACT CTGCGGCTGG AACCTATACG
CTGACCTTAA CCGTTACCGA TGCCAAAGGT ACAAAAGTCA CCGCCACGAA AACCGTGGTA
GTCAGCTTAC CGTTAACTGC CAGCTTTAGT TTCAATGCGA GTCTGCTAAC GGTGAACTTT
AGCAACACCT CGACTGGCGG AGCTGGAAGC GTGAGCTATT TATGGAACTT TGGTGATGGC
ACCACAAGTA CGGCGGTGTC ACCATCCCAT ACTTACGTGA ATGCGGGAAC CTACACCGTG
ACGCTCACGG TTAAAGATAC CCAAAATGCG ACCGCAAGCA GTAGCTCAAG CGTCACCGTA
TCTGCCCCCA TCGCCCCCCC ATCGGAAGGT TCTGGTGGCG GAGGTAGCTT AGGTTGGCTT
AGTCTTCTGC TGCTCGGTGG TTTTGCATGG CGTCGCCAGC GCCAATAA
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| Protein sequence | MRSKKSITAF GLMLALLSGT SIAAPNHTPA DAGVINKERI LYWLIKRGEV SEDASDSVKQ
AAVEAYIARA SLAQPKEPRV VIEAEQERLH KAKTTAMMRA PAQRALADAD VTKTVKVLTV
LIDFPDLRYN NNGLTASDTD MYYSSYPASH YKNLLFSTAG FSGPQGQSLD SAYQYYQAVS
GKTFFFTGDV KGWYTAGQHA DYYGANDADT SNDVKVGELV KEAVSQAVAS MSAAELASYD
IEDPYDLNGN GNLNEADGII DHVMIFHSSI GEETGGGKLG ANAIWSHRYY VNQSTQGYTL
PGTNKKVFGY TIQPIDAATG VCTHEFGHDL GLPDEYDTTD NANKDGSPVG YWSLMSGGSW
TGTISGAQPS GFSPYARSYL QTKYKGKWLN EREISLDTIP RSGMEITLNQ AINQDAVNQI
SIPLPATQIA FKAPYQGTYQ YYSGQGNMLA NSMSFATTLP VTSDKLTLSM QASWDIENSF
DYMQVNVDGT AIAGNYTQSS NTINSARHII TGKSSSIPTS VGDDAWVALE YDLSAYAGKA
VTIEFNYVTD EAVSGSGITI DNISIKQGTS ELYADNAEAA NKATFAGYSR ITNTRPGPSS
RYLIQLRSHN GVDAGLKSKG FDPGVLLWLE NASYSDNNVS DHPGRSLIGV IDADQNMIGT
NSTDVQIRDA AFSTVKQTAY FGDNSLDAIS LFDDSLDYSA PLQPQSGMQL QQLGLTMEVV
AQASDNSTAV IRLANANADP ALTPLTAAIN LSQNGQAVTV SAAVEGGEGA YSYAWDFGVA
GATSTSATAV YTYSAAGTYT LTLTVTDAKG TKVTATKTVV VSLPLTASFS FNASLLTVNF
SNTSTGGAGS VSYLWNFGDG TTSTAVSPSH TYVNAGTYTV TLTVKDTQNA TASSSSSVTV
SAPIAPPSEG SGGGGSLGWL SLLLLGGFAW RRQRQ
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