Gene SO_0103 details

Gene Information

• Locus tag: SO_0103
• Symbol: fdnI
• ID: 1168000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 112631
• End bp: 113272
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637342115
• Product: formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit
• Protein accession: NP_715745
• Protein GI: 24371703
• COG category: [C] Energy production and conversion
• COG ID: [COG2864] Cytochrome b subunit of formate dehydrogenase
• TIGRFAM ID: [TIGR01583] formate dehydrogenase, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGC ATAACAAGCA AGAAATGGTA GTGCGTCACA AGCTGTTCGA CCGCATCTGT 
CATTGGTTCA TTGTGGCTGT GGGTCTAGTC ACCTTTCTGA CGGGCTTTTC CTTCTTCTAT 
CCCTCCTTCC AATGGTTGGG CGCGATAGCG GGCACACCGC AATTGGCGAA GTTTATTCAT 
CCTATTGCTG GCCTGTTGAT GTGTTTACCT TTGATGTTGA TGTTGGTGCG TTATTACCAC 
CACAACAAAT GGGAAAAACA CGATCTGGCT TGGATGCTTG CCATCAAGGA TGTGATGTTC 
GAGAACGAGG AAAAAATCCC GCCTATCGGC CATTACAACC CCGGTCAAAA AGTGCTGTTC 
CGTGCTTTTG TGTTGACTTC TATCACCTTA ACCGTGACGG GATTCATCAT GTGGCAACCC 
TACTTTGCGC CGTACTTTTC CGCCACTGTG GTGGGCTGGG CGATTGTGCT GCATGCCATT 
AGCGCCTTGA TCATGTTGAT GTTTGTGATG GTGCACTTTT GGATGGCGAG CTGGGTGGAA 
GGCTCTATCA CTGGCATGCT TTACGGCAAG GTCTCTAAGG CGTGGTGCCG TAAACATCAT 
CCGTTGATGT TGGATGAACA TTCGGACGTG GAGAAACATT AA 

 

Protein sequence

MSKHNKQEMV VRHKLFDRIC HWFIVAVGLV TFLTGFSFFY PSFQWLGAIA GTPQLAKFIH 
PIAGLLMCLP LMLMLVRYYH HNKWEKHDLA WMLAIKDVMF ENEEKIPPIG HYNPGQKVLF 
RAFVLTSITL TVTGFIMWQP YFAPYFSATV VGWAIVLHAI SALIMLMFVM VHFWMASWVE 
GSITGMLYGK VSKAWCRKHH PLMLDEHSDV EKH