Gene SO_0078 details

Gene Information

• Locus tag: SO_0078
• ID: 1167976
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 92009
• End bp: 92812
• Gene Length: 804 bp
• Protein Length: 267 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637342091
• Product: hypothetical protein
• Protein accession: NP_715720
• Protein GI: 24371678

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCTAT CTCGATTTTG CCATGGTTTA CTGCTTGTAG GCCTAACGCT CTTGTCCGGC 
TGCCAACAAC GCCAAGCCAT TTTGATCGTT CAAGGTGTTG AGCCCATAAA AGTAAAGGCT 
ATTGAAACCG CCTTAATACA ATCCGGCTGG CGGGTGAGCC AAAGCCCTGT TGCTATTCCG 
GCAGAATTCC CTGATGCGGT GCTTGCCACC AATCCCGCTT ATCGAGATAC CCAAGCTATC 
TCTGATATTA AAAATATCCT AAAAGGCCAA GGCGTTACCG AACCGACAGA GTATAAATTT 
GCCGAAGGTA AGCACTTTTT CAGTACAAAT AATGTCGGTA TTTACTTACG CAATAGCGAG 
CAGACTTCAC CAGCCTTACC ATCATCTTTT ATCAGAACAG ATCGTTGCGC AGCGGGCGAT 
GCAACCCTTA ATCTCACGCC GCAAAGCCAA GCTGTACTCG AATATGAAAA GCCTATTAAT 
GATAACTTTG AGCTAGAGCA GCACACCGGA ACCTGGACTT TTGATGGCGT AAAATTGCAG 
GTTCAATTCA ATCATGTTCA GCAAACGTTT CTGCTCACTC ACGAACAAAG AGACACATGG 
CGTGGCCCTA GTCCTGCAGA TATCTACACC CCGAGCCTAG ATGCTGATAT TAACGTGCTT 
AACTGCACCT TTGTGATTAT CTATCTTGAG CAAGGGATAA ACCGATGCGA GCCTAACCCT 
GTGCCTGCAC CAATAAAAAT GCATGAACTG CATAGCAGAT TAATAGGATT TATACCCCGA 
GTAATAATAT GGCGCTTAAT TTGA 

 

Protein sequence

MKLSRFCHGL LLVGLTLLSG CQQRQAILIV QGVEPIKVKA IETALIQSGW RVSQSPVAIP 
AEFPDAVLAT NPAYRDTQAI SDIKNILKGQ GVTEPTEYKF AEGKHFFSTN NVGIYLRNSE 
QTSPALPSSF IRTDRCAAGD ATLNLTPQSQ AVLEYEKPIN DNFELEQHTG TWTFDGVKLQ 
VQFNHVQQTF LLTHEQRDTW RGPSPADIYT PSLDADINVL NCTFVIIYLE QGINRCEPNP 
VPAPIKMHEL HSRLIGFIPR VIIWRLI