Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0027 |
Symbol | |
ID | 1167925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 31656 |
End bp | 32210 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637342036 |
Product | protoporphyrinogen oxidase, putative |
Protein accession | NP_715669 |
Protein GI | 24371627 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG4635] Flavodoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGCA TCCTGGTGCT TTATTTTACC CGAGGAGGCC ATACGGCCAA GATTGCCAAT GCAATAGCGG AGCAATTAAC CCTGCGTGGC GCAAAGGTTG ACTTAGTCGA TATCAATAGT GCGGCTGCAA CACGAATCAA CTGGTCCGAT TATCAGCTGG TGGCTTTGGG TGCCTGTGTA CTCTATGGCA CTTATGATAA GAGTGTATTT CAATTTATTG AGCAACATGT GCAGGCTTTG AGTTTTTTGC CAAACAGTTT TTTCTGCGTC AACGTGGTCG CACGTAATCC GGAGAAACGT ATTCCTGAAA ACAATAAATA CCTGCAAAAG TTTATCACTC TATCTCCTTG GACTCCCGCA GATTTGAAGA TTATTGCTGG TAAAGTCGAT TATCCATCTT GGCCTTGGTA CGACAGATTA ATGATCCAGT TAATTATGAA AATCACTAAA GGCCCAACGG ATCCAAAAGC AGTTATTGAT TATACCGATT GGGAAGATGT GAAAGTCTAT GCCGACCATC TGCTGACCTT GGTCGAGGTT GCTGAACCTG CCTAA
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Protein sequence | MTRILVLYFT RGGHTAKIAN AIAEQLTLRG AKVDLVDINS AAATRINWSD YQLVALGACV LYGTYDKSVF QFIEQHVQAL SFLPNSFFCV NVVARNPEKR IPENNKYLQK FITLSPWTPA DLKIIAGKVD YPSWPWYDRL MIQLIMKITK GPTDPKAVID YTDWEDVKVY ADHLLTLVEV AEPA
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