| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0024 |
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| Symbol | trkH-1 |
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| ID | 1167922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 29096 |
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| End bp | 30556 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637342033 |
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| Product | potassium uptake protein TrkH |
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| Protein accession | NP_715666 |
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| Protein GI | 24371624 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATACA AAACCATAAT AAGAATCATA GGCCTGTTAA TCGGCCTGTT CTCCATCACT
ATGCTGCCAC CAGCCTTAAT CGCCATTTGG TATAACGATG GCGGCGGAAC TGCGTTTATT
CAGGCCTTTT TTGTCAGCTT ATTTATCGGT TTTTGGCTCT GGTATCCTCA TCGCCGCTGT
AAGGAGGAAT TACGTACCCG TGAGGGATTT CTCATCGTCG TGCTGTTTTG GACTGTGCTG
GGTTCTATCG GGGCTTTACC TTTTATCTTC TCTAGTCAAC CGGATCTCAG TTGGACGGAC
AGTTTTTTTG AATCTTTTTC CGCGCTAACC ACCACTGGGG CTACAGTCAT TGTGGGGCTG
GACTCCTTAC CTAAAGCGAT TTTATTTTAT CGACATTTGC TGCAATGGCT TGGCGGTATG
GGGATCATCG TACTGGCTGT CGCGATTTTA CCTGTACTGG GCATTGGCGG GATGCAGCTC
TATCGCGCTG AAATCCCTGG GCCAGTAAAA GACAGTAAGA TGACGCCTAG GATTGCCGAG
ACGGCCAAGG CGTTATGGTA CATCTATCTA TTGCTGACTA TCAGCTGTGC TGGTGCCTAT
TGGTTGGCGG GGATGAGCAT GTTCGATGCC ATTTGTCACT CGTTTTCGAC CATCGCCATC
GGCGGTTTTT CAACCCATGA TGCCAGTATG GGCTACTTTA ACAGCCCTGT AATTAACCTG
ATTTGTGTGT TCTTTTTAAT TGTCTCTGCA GTGAATTTTA GCGTGCATTT TGCGGCATTT
TCGTGGAGAG GTATTAACTT GAAGGTCTAT TTTAGAGATA CCGAATTTAA AGTGTTAGTC
GCAATTCAAT TGCTCTTAAC CGCGATTTGT TTTTTTACCT TGTATTTCTA TTCTGATATT
TATGACACGC CGGAAGAAAC CTTAAATCAT GCCTTATTCC AAGCGGTTTC GATAGCAACC
ACCACAGGGT TTGGCACAGA CAGTTTCAAT ATGTGGCCAT TATTTTTGCC AATGTTATTA
ATGTTTTCGA GCTTCATTGG TGGTTGTGGT GGCTCGACCG CGGGGGGGAT TAAGGTTATT
CGGGTCATTC TCTTGTTGTT GCAGGGGTCT CGCGAGCTAA AACGTCTTGT TCATCCCAAG
GCGATGTTTT CGATTCGAAT AGGCTCAAAG GCGCTGCCTG ACCGTATTGT CGATGCCGTG
TGGGGCTTTT TTTCGGCCTA TGCTTTAGTT TTCGTGCTGT GTATGTTGGC GCTAATGGCA
ATGGGGCTCG ATGACATCAC TTCCTTTAGT GCTACGGCCG CTTGCTTAAA TAACCTCGGC
CCAGGTTTAG GTGAGGTTGC GAGTAATTAT GCCAGTATTG GTGATGGCGC CAAATGGGTG
CTGGTGGTAG CTATGCTATT TGGTCGCCTT GAAATCTTTA CCTTGTTGAT TTTGTTCACG
CCAACTTTCT GGAAAGATTA A
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| Protein sequence | MQYKTIIRII GLLIGLFSIT MLPPALIAIW YNDGGGTAFI QAFFVSLFIG FWLWYPHRRC
KEELRTREGF LIVVLFWTVL GSIGALPFIF SSQPDLSWTD SFFESFSALT TTGATVIVGL
DSLPKAILFY RHLLQWLGGM GIIVLAVAIL PVLGIGGMQL YRAEIPGPVK DSKMTPRIAE
TAKALWYIYL LLTISCAGAY WLAGMSMFDA ICHSFSTIAI GGFSTHDASM GYFNSPVINL
ICVFFLIVSA VNFSVHFAAF SWRGINLKVY FRDTEFKVLV AIQLLLTAIC FFTLYFYSDI
YDTPEETLNH ALFQAVSIAT TTGFGTDSFN MWPLFLPMLL MFSSFIGGCG GSTAGGIKVI
RVILLLLQGS RELKRLVHPK AMFSIRIGSK ALPDRIVDAV WGFFSAYALV FVLCMLALMA
MGLDDITSFS ATAACLNNLG PGLGEVASNY ASIGDGAKWV LVVAMLFGRL EIFTLLILFT
PTFWKD
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