| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0015 |
|---|
| Symbol | glyQ |
|---|
| ID | 1167913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 17256 |
|---|
| End bp | 18161 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637342024 |
|---|
| Product | glycyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | NP_715657 |
|---|
| Protein GI | 24371615 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA AACACGACGT AAAAACATTT CAGGGTTTCA TTCTAACCCT ACAGGAATAT
TGGGCGCAGC AAGGCTGTGC AATCGTTCAA CCTTTAGATA TGGAAGTCGG TGCGGGCACA
TTCCACCCAC AAACCTTCCT ACGCTCTTTA GGGCCTGAAC CAATGAGCAG TGCCTATGTG
CAGCCTTCGC GCCGCCCGAC CGACGGCCGT TACGGTGAAA ACCCAAACCG TCTGCAGCAC
TACTACCAAT TCCAAGTCGT GTTAAAACCG TCACCGGATA ATATCCAAGA ACTCTATTTA
GGTTCTCTGC AAGCACTGGG TATTGATACC CAAATCCATG ATATCCGCTT TGTGGAAGAC
AACTGGGAAT CACCAACGCT AGGCGCTTGG GGTTTAGGTT GGGAAGTCTG GCTAAACGGC
ATGGAAGTAA CTCAGTTTAC CTACTTCCAG CAGGTCGGCG GCTTAGAGTG TAGCCCTGTC
ACAGGTGAAA TCACCTACGG TTTAGAGCGT CTCGCCATGT ATATCCAAGG TGTGGATAGC
GTGTACGACC TCGTGTGGAC CGATGGCCCA ATGGGCCGCA TCACCTATGG CGATGTGTTC
CACCAAAACG AAGTTGAGCA ATCGACCTAT AACTTTGAGC ACGCCGATGT CGACTTTATG
TTTGCTCTGT TCGATCAATG CGAAAAAATG TGTCAGCACT TATTGTCGCT TGAAAAACCA
TTACCTCTAC CCGCCTATGA GCAAGTCATG AAAGCCTCAC ACGCCTTCAA CCTGCTCGAT
GCTCGCCACG CCATTTCAGT GACAGAACGT CAGCGTTATA TCCTGCGCGT TCGTACAATG
GCTAAAGCCG TTGCAGAATC CTATTATCAG GCACGCGAAG CGCTTGGCTT CCCAATGTGT
AAGTAG
|
|---|
| Protein sequence | MTTKHDVKTF QGFILTLQEY WAQQGCAIVQ PLDMEVGAGT FHPQTFLRSL GPEPMSSAYV
QPSRRPTDGR YGENPNRLQH YYQFQVVLKP SPDNIQELYL GSLQALGIDT QIHDIRFVED
NWESPTLGAW GLGWEVWLNG MEVTQFTYFQ QVGGLECSPV TGEITYGLER LAMYIQGVDS
VYDLVWTDGP MGRITYGDVF HQNEVEQSTY NFEHADVDFM FALFDQCEKM CQHLLSLEKP
LPLPAYEQVM KASHAFNLLD ARHAISVTER QRYILRVRTM AKAVAESYYQ AREALGFPMC
K
|
|---|
| |