Gene SNSL254_pSN254_0108 details

Gene Information

• Locus tag: SNSL254_pSN254_0108
• Symbol: ssb
• ID: 4929391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_009140
• Strand: +
• Start bp: 95575
• End bp: 96102
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642572407
• Product: single-strand DNA-binding protein
• Protein accession: YP_001101982
• Protein GI: 134047264
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 54
• Fosmid unclonability p-value: 0.127981
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTAAAG GCGTCAACAA AGTAATTCTG GTCGGTAATC TCGGTTCTGA CCCGGAAATT 
CGCTACATGC CAAGCGGCAC TGCCGTTGCC AACTTCAACG TTGCAACAAC GGATACGTGG 
CGCGATAAGC AGTCTGGCGA GCAAAGAGAG CATACTGAGT GGCACCGTAT TGTGCTTAAA 
GGTCGTTTGG CGGAAGTCGC TGGTGAGTAC CTGAAAAAGG GCTCCCAAGT CTATCTCGAA 
GGGAGCAACC GCACCCGGAA GTGGACTGAC AGCCAACAAA TCGAGCGCTA CACCACCGAA 
GTACACTGCG TTGAAATGCA GATGCTTGGT GGTCGTGGAA ATGCACCTCA GGACAACTCT 
CAACGTGCAG CGCCCCAAAA AGGGCAACGT ACAGGAGCCG GTACGCAATC TGCTCCTGTG 
CAGCAATCAG CACCGCAAGG TGGTATGGGC GGAGGCTATG GTCCCGCTCC TGATGGCTGG 
GATGATGACA TCCCGTTCAT GCGGCTGCAC CACTTGGCTG GCGGGTAA 

 

Protein sequence

MSKGVNKVIL VGNLGSDPEI RYMPSGTAVA NFNVATTDTW RDKQSGEQRE HTEWHRIVLK 
GRLAEVAGEY LKKGSQVYLE GSNRTRKWTD SQQIERYTTE VHCVEMQMLG GRGNAPQDNS 
QRAAPQKGQR TGAGTQSAPV QQSAPQGGMG GGYGPAPDGW DDDIPFMRLH HLAGG